Updated on 2024/06/07

写真a

 
KATAKURA,Yoshio
 
Organization
Faculty of Chemistry, Materials and Bioengineering Professor
Title
Professor
Contact information
メールアドレス
External link

Degree

  • 農学博士 ( 1990.3 )

Research Interests

  • solid state fermentation

  • breeding of yeast

  • biomass

  • engineering ethics

  • Lactic acid bacteria

  • bioethanol;biomass;solid state fermentation;breeding of yeast

  • adhesion

  • delignification

  • research ethics

  • membrane vesicle

  • high cell density culture

  • intestinal flora

Research Areas

  • Humanities & Social Sciences / Philosophy and ethics  / 技術者倫理 研究倫理

  • Manufacturing Technology (Mechanical Engineering, Electrical and Electronic Engineering, Chemical Engineering) / Biofunction and bioprocess engineering  / 培養工学

  • Life Science / Applied microbiology

Education

  • Osaka University   Graduate School, Division of Engineering

    1982 - 1984

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  • Osaka University   Faculty of Engineering

    - 1982

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Research History

  • Kyoto Prefectural University of Medicine

    2020

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  • Shinshu University

    2017

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  • Kansai University   Faculty of Chemistry , Materials and Bioengineering   Professor

    2010.4

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  • Osaka University

    2010 - 2022

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  • Osaka University   Graduate School of Engineering   Associate Professor

    2003.5 - 2010.4

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  • Osaka City University

    2003

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  • Osaka University   School of Engineering   Research Assistant

    1993.11 - 2003.4

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  • オリエンタル酵母工業株式会社   中央研究所   研究員

    1984.4 - 1993.10

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Professional Memberships

Committee Memberships

  • 日本生物工学会培養技術研究部会   部会長  

    2020.6 - Present   

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  • 日本乳酸菌学会   会長  

    2019.7 - 2023.6   

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  • 日本医療研究開発機構   研究倫理アドバイザー  

    2019 - Present   

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  • 日本学術振興会   研究公正アドバイザー  

    2018 - Present   

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  • 日本生物工学会   関西支部長  

    2017.4 - 2019.3   

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  • 新エネルギー・産業技術総合開発機構   技術委員  

    2017 - 2019   

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    Committee type:Government

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  • 公正研究推進協会   公正研究推進協会委員会委員  

    2016 - Present   

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  • 日本学術振興会   科学研究費委員会専門委員  

    2015 - 2016   

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  • 日本生物工学会   代議員  

    2009.9 - Present   

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  • 日本乳酸菌学会   理事  

    2009.7 - 2015.6   

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Papers

  • RNA-Based Anti-Inflammatory Effects of Membrane Vesicles Derived from Lactiplantibacillus plantarum

    Shino Yamasaki-Yashiki, Fumie Kawashima, Azusa Saika, Ryota Hosomi, Jun Kunisawa, Yoshio Katakura

    Foods   13 ( 6 )   967 - 967   2024.3

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    Publishing type:Research paper (scientific journal)   Publisher:MDPI AG  

    Bacteria generally release extracellular membrane vesicles (MVs), which are nanoparticles that play important roles in bacterial–bacterial and bacterial–host communication. As probiotics, lactic acid bacteria provide diverse health benefits to their hosts. In this study, we found that the Gram-positive lactic acid bacteria Lactiplantibacillus plantarum subsp. plantarum NBRC 15891 produce high amounts of MVs (LpMVs), and that LpMVs inhibit interleukin (IL)-8 production induced by lipopolysaccharide in intestinal epithelial HT29 cells. Heat- or UV-killed bacterial cells did not exhibit anti-inflammatory effects, and there was no uptake of these bacterial cells; contrarily, LpMVs were taken up into the cytoplasm of HT29 cells. Small RNAs extracted from LpMVs also suppressed IL-8 production in HT29 cells, suggesting that RNAs in the cytoplasm of bacterial cells are encapsulated in the MVs and released from the cells, which may be delivered to HT29 cells to exert their anti-inflammatory effects. In addition, administration of LpMVs to mice with dextran sodium sulfate-induced colitis alleviated colitis-induced weight loss and colon length shortening, indicating that LpMV intake is likely to be effective in preventing or ameliorating colitis.

    DOI: 10.3390/foods13060967

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  • Analysis of the effects of specific growth rate of Lactococcus lactis MG1363 on aerobic metabolism and its application to high-density culture Reviewed

    Journal of Bioscience and Bioengineering   136 ( 2 )   129 - 135   2023

  • High productivity of immunostimulatory membrane vesicles of <i>Limosilactobacillus antri</i> using glycine

    Shino YAMASAKI-YASHIKI, Yu SAKAMOTO, Keiko NISHIMURA, Azusa SAIKA, Takeshi ITO, Jun KUNISAWA, Yoshio KATAKURA

    Bioscience of Microbiota, Food and Health   2023

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    Publishing type:Research paper (scientific journal)   Publisher:BMFH Press  

    DOI: 10.12938/bmfh.2023-029

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  • 乳酸菌の好気的流加培養

    片倉啓雄, 一瀬 涼, 神原大樹

    日本乳酸菌学会誌   33(1), 12-19   2022.3

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  • Mechanisms underlying enhanced IgA production in Peyer's patch cells by membrane vesicles derived from Lactobacillus sakei. International journal

    Yuki Miyoshi, Azusa Saika, Takahiro Nagatake, Ayu Matsunaga, Jun Kunisawa, Yoshio Katakura, Shino Yamasaki-Yashiki

    Bioscience, biotechnology, and biochemistry   85 ( 6 )   1536 - 1545   2021.5

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    Language:English   Publishing type:Research paper (scientific journal)  

    We analyzed the mechanisms underlying enhanced IgA production in the cells of Peyer's patch cells via membrane vesicles derived from Lactobacillus sakei subsp. sakei NBRC 15893. Depletion of CD11c+ cells from Peyer's patch cells suppressed the enhanced IgA production mediated by membrane vesicles. Meanwhile, the stimulation of bone-marrow-derived dendritic cells with membrane vesicles increased gene expression of inducible nitric oxide synthase, retinaldehyde dehydrogenase 2, and several inflammatory cytokines. The production of nitric oxide and interleukin (IL)-6 by membrane vesicle stimulation was induced via Toll-like receptor 2 on bone marrow-derived dendritic cells. Inhibition of inducible nitric oxide synthase and retinaldehyde dehydrogenase 2, as well as the neutralization of IL-6 in Peyer's patch cells, suppressed the enhanced IgA production by membrane vesicle stimulation. Hence, nitric oxide, retinoic acid, and IL-6 induced by membrane vesicles play crucial roles in the enhanced IgA production elicited by membrane vesicles in Peyer's patch cells.

    DOI: 10.1093/bbb/zbab065

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  • Adhesion mechanisms of <i>Bifidobacterium animalis</i> subsp. <i>lactis</i> JCM 10602 to dietary fiber Reviewed

    Maria Taniguchi, Minori Nambu, Yoshio Katakura, Shino Yamasaki-Yashiki

    Bioscience of Microbiota, Food and Health   40 ( 1 )   59 - 64   2021

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:BMFH Press  

    DOI: 10.12938/bmfh.2020-003

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  • Suppression of lactate production by aerobic fed-batch cultures of <i>Lactococcus lactis</i> Reviewed

    Anna Sano, Misato Takatera, Mio Kawai, Ryo Ichinose, Shino Yamasaki-Yashiki, Yoshio Katakura

    Journal of Bioscience and Bioengineering   130 ( 4 )   402 - 408   2020.10

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    Authorship:Corresponding author   Language:English   Publishing type:Research paper (scientific journal)   Publisher:Elsevier BV  

    DOI: 10.1016/j.jbiosc.2020.06.004

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  • Suppression of lactate production in fed-batch culture of some lactic acid bacteria with sucrose as the carbon source Reviewed

    Mio Kawai, Asami Tsuchiya, Junya Ishida, Nobuo Yoda, Shino Yashiki-Yamasaki, Yoshio Katakura

    Journal of Bioscience and Bioengineering   129 ( 5 )   535 - 540   2020.5

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    DOI: 10.1016/j.jbiosc.2019.11.009

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  • Suppression of lactate production of <i>Lactobacillus reuteri</i> JCM1112 by co-feeding glycerol with glucose Reviewed

    Ryo Ichinose, Yuichi Fukuda, Shino Yamasaki-Yashiki, Yoshio Katakura

    Journal of Bioscience and Bioengineering   129 ( 1 )   110 - 115   2020.1

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    Publishing type:Research paper (scientific journal)   Publisher:Elsevier BV  

    DOI: 10.1016/j.jbiosc.2019.07.004

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  • Suppression of lactate production by using sucrose as a carbon source in lactic acid bacteria Reviewed

    Mio Kawai, Risa Harada, Nobuo Yoda, Shino Yamasaki-Yashiki, Eiichiro Fukusaki, Yoshio Katakura

    Journal of Bioscience and Bioengineering   129 ( 1 )   47 - 51   2020.1

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    DOI: 10.1016/j.jbiosc.2019.06.017

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  • Lactobacillus sakei由来メンブランベシクルによるIgA産生促進メカニズムの解明

    三好 柚紀, 井谷 彩乃, 雑賀 あずさ, 長竹 貴広, 松永 安由, 國澤 純, 片倉 啓雄, 山崎 思乃

    日本生物工学会大会講演要旨集   2019年   178 - 178   2019.8

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    Language:Japanese   Publisher:(公社)日本生物工学会  

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  • Lactobacillus antriが産生するメンブランベシクルのIgA産生促進作用の解析

    佐々木 晴菜, 仲田 真穂, 前田 新一, 雑賀 あずさ, 國澤 純, 片倉 啓雄, 山崎 思乃

    日本生物工学会大会講演要旨集   2019年   178 - 178   2019.8

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    Language:Japanese   Publisher:(公社)日本生物工学会  

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  • IgA-enhancing effects of membrane vesicles derived from <i>Lactobacillus sakei</i> subsp. <i>sakei</i> NBRC15893 Reviewed

    Shino YAMASAKI-YASHIKI, Yuki MIYOSHI, Tomoya NAKAYAMA, Jun KUNISAWA, Yoshio KATAKURA

    Bioscience of Microbiota, Food and Health   38 ( 1 )   23 - 29   2019

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    Publishing type:Research paper (scientific journal)   Publisher:BMFH Press  

    DOI: 10.12938/bmfh.18-015

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  • 技術者倫理科目の授業改善

    大来雄二, 片倉啓雄, 下村直行

    電気学会教育フロンティア研究会資料   FIE-17-032   2017

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  • Analysis of gene expression profiles of <i>Lactobacillus paracasei</i> induced by direct contact with <i>Saccharomyces cerevisiae</i> through recognition of yeast mannan. Reviewed

    S. Yamasaki-Yashiki, H. Sawada, M. Kino-oka, Y. Katakura

    Bioscience of Microbiota, Food and Health   36 ( 1 )   17 - 25   2017

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    Authorship:Last author, Corresponding author   Language:English   Publisher:BMFH Press  

    <p>Co-culture of lactic acid bacteria (LAB) and yeast induces specific responses that are not observed in pure culture. Gene expression profiles of <i>Lactobacillus paracasei</i> ATCC 334 co-cultured with <i>Saccharomyces cerevisiae</i> IFO 0216 were analyzed by DNA microarray, and the responses induced by direct contact with the yeast cells were investigated. Coating the LAB cells with recombinant DnaK, which acts as an adhesive protein between LAB and yeast cells, enhanced the ratio of adhesion of the LAB cells to the yeast cells. The signals induced by direct contact were clarified by removal of the LAB cells unbound to the yeast cells. The genes induced by direct contact with heat-inactivated yeast cells were very similar to both those induced by the intact yeast cells and those induced by a soluble mannan. The top 20 genes upregulated by direct contact with the heat-inactivated yeast cells mainly encoded proteins related to exopolysaccharide synthesis, modification of surface proteins, and transport systems. In the case of the most upregulated gene, LSEI_0669, encoding a protein that has a region homologous to polyprenyl glycosylphosphotransferase, the expression level was upregulated 7.6-, 11.0-, and 8.8-fold by the heat-inactivated yeast cells, the intact yeast cells, and the soluble mannan, respectively, whereas it was only upregulated 1.8-fold when the non-adherent LAB cells were not removed before RNA extraction. Our results indicated that the LAB responded to direct contact with the yeast cells through recognition of mannan on the surface of the yeast.</p>

    DOI: 10.12938/bmfh.BMFH-2016-015

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  • Simple chronic colitis model using hypopigmented mice with a Hermansky–Pudlak syndrome 5 gene mutation Reviewed

    Yumi Itoh, Yasuo Nagaoka, Yoshio Katakura, Hidehisa Kawahara, Hiroshi Takemori

    Pigment Cell and Melanoma Research   29 ( 5 )   578 - 582   2016.9

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    Pigmentation in mammals is important for protection of skin and eyes from ultraviolet radiation. Dysregulation of pigmentation is often associated with other conditions that are not directly linked to pigmentation. Here, we isolated spontaneously occurring hypopigmented mice that occasionally experienced severe diarrhea during lactation. Treatment of these mice with dextran sulfate sodium salt, a conventional method to induce acute colitis, caused chronic diarrhea with granulomatous colitis. Gene mapping and sequencing revealed that the mice had a nonsense mutation in the Hermansky–Pudlak syndrome (Hps)5 gene. As some HPS patients can develop granulomatous colitis, the simple induction of chronic colitis in spontaneously mutated Hps5-deficient mice may become an invaluable model for exploring treatment options in patients with HPS as well as other patients with inflammatory bowel disease.

    DOI: 10.1111/pcmr.12504

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  • 2E16 Communication between engineers and managers

    KATAKURA Yoshio

    Proceedings of Annual Conference of Japanese Society for Engineering Education   2016   334 - 335   2016

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    Language:Japanese   Publisher:Japanese Society for Engineering Education  

    DOI: 10.20549/jseeja.2016.0_334

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  • Commitment and Well-Being of Engineers : How to Make Students Notice and Consider Invited Reviewed

    61-9, 569-574 ( 9 )   569 - 574   2016

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    Language:Japanese  

    CiNii Books

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  • 工学における安全と倫理 Reviewed

    片倉 啓雄

    工学教育   63-5, 13-17   2015

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  • Optimal Production of a Fusion Protein Consisting of a Single-chain Variable Fragment Antibody Against a Tumor-associated Antigen and Interleukin-2 in Fed-batch Culture of Pichia pastoris Reviewed

    Sakorn Anuleejun, Tanapat Palaga, Yoshio Katakura, Motomu Kuroki, Masahide Kuroki, Suchada Chanprateep Napathorn

    ANTICANCER RESEARCH   34 ( 8 )   3925 - 3935   2014.8

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    Background/Aim: The aim of the present study was to establish the strategy for producing a single-chain variable fragment (scFv) antibody fused with interleulin-2 (IL2) by Pichia pastoris and to optimize production during fed-batch cultivation in a 5-l fermenter. Materials and Methods: We constructed a fusion sequence consisting of an scFv gene derived from a mouse monoclonal antibody against a tumor-associated antigen (designated MK-1 antigen) and human interleulin-2 (IL-2) gene, ligated the sequences to expression vector pPICZ alpha-A and separately transformed the constructs into Pichia pastoris strains GS115 and KM71H. Results: The highest concentration of secreted fusion protein, 738 +/- 44 mg/l, was obtained after a 60-h induction. To investigate the specific binding activity of the partially purified fusion protein, we used an enzyme-linked immunosorbent assay and antigen from a whole-cell lysate. Student's t-test showed that the specific binding activity of the partially-purified fusion protein to the lysate of Chinese hamster ovary cell lines expressing the MK-1 antigen was significantly higher than that of the lysate of CHO cell lines that do not express MK-1. Conclusions: The method described here permits the production of substantial amounts of the fusion protein for conducting functional studies on the biological role of these fusion proteins.

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  • Feasibility Study of Ethanol Production from Food Wastes by Consolidated Continuous Solid-State Fermentation Reviewed

    Churairat Moukamnerd, Hidehisa Kawahara, Yoshio Katakura

    Journal of Sustainable Bioenergy Systems   03 ( 02 )   143 - 148   2013

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    Authorship:Last author, Corresponding author   Publishing type:Research paper (scientific journal)   Publisher:Scientific Research Publishing, Inc.  

    DOI: 10.4236/jsbs.2013.32020

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    Other Link: http://www.scirp.org/journal/doi.aspx?DOI=10.4236/jsbs.2013.32020

  • Isolation of a novel promoter for efficient protein expression by Aspergillus oryzae in solid-state culture Reviewed

    Hiroki Bando, Hiromoto Hisada, Hiroki Ishida, Yoji Hata, Yoshio Katakura, Akihiko Kondo

    Applied Microbiology and Biotechnology   92 ( 3 )   561 - 569   2011.11

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:Springer Science and Business Media LLC  

    A novel promoter from a hemolysin-like protein encoding the gene, hlyA, was characterized for protein overexpression in Aspergillus oryzae grown in solid-state culture. Using endo-1,4-β-glucanase from A. oryzae (CelA) as the reporter, promoter activity was found to be higher than that of the α-amylase (amyA) and manganese superoxide dismutase (sodM) genes not only in wheat bran solid-state culture but also in liquid culture. Expression of the A. oryzae endoglucanase CelB and two heterologous endoglucanases (TrEglI and TrEglIII from Trichoderma reesei) under the control of the hlyA promoter were also found to be stronger than under the control of the amyA promoter in A. oryzae grown in wheat bran solid-state culture, suggesting that the hlyA promoter may be useful for the overproduction of other proteins as well. In wheat bran solid-state culture, the productivity of the hlyA promoter in terms of protein produced was high when the cultivation temperature was 30°C or 37°C, when the water content was 0.6 or 0.8 ml/g wheat bran, and from 48 to 72 h after inoculation. Because A. oryzae sporulated actively under these conditions and because hemolysin has been reported to play a role in fungal fruiting body formation, high-level expression of hlyA may be related to sporulation. © 2011 Springer-Verlag.

    DOI: 10.1007/s00253-011-3446-5

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    Other Link: http://link.springer.com/article/10.1007/s00253-011-3446-5/fulltext.html

  • Strategy for preventing bacterial contamination by adding exogenous ethanol in solid-state semi-continuous bioethanol production Reviewed

    Yoshio Katakura, Churairat Moukamnerd, Satoshi Harashima, Masahiro Kino-oka

    Journal of Bioscience and Bioengineering   111 ( 3 )   343 - 345   2011.3

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    A strategy for preventing reduction of ethanol yield in fermentation caused by bacterial contamination was developed. In solid-state ethanol fermentation in which saccharification, fermentation and ethanol recovery are performed simultaneously, the addition of exogenous ethanol to the fermentation mixture at the start of fermentation at 50gkg-1 prevented contamination, and the ethanol yield reached 0.50gg-1. © 2010 The Society for Biotechnology, Japan.

    DOI: 10.1016/j.jbiosc.2010.11.012

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  • Ethanol production from biomass by repetitive solid-state fed-batch fermentation with continuous recovery of ethanol Reviewed

    Churairat Moukamnerd, Masahiro Kino-oka, Minetaka Sugiyama, Yoshinobu Kaneko, Chuenchit Boonchird, Satoshi Harashima, Hideo Noda, Kazuaki Ninomiya, Suteaki Shioya, Yoshio Katakura

    APPLIED MICROBIOLOGY AND BIOTECHNOLOGY   88 ( 1 )   87 - 94   2010.9

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    To save cost and input energy for bioethanol production, a consolidated continuous solid-state fermentation system composed of a rotating drum reactor, a humidifier, and a condenser was developed. Biomass, saccharifying enzymes, yeast, and a minimum amount of water are introduced into the system. Ethanol produced by simultaneous saccharification and fermentation is continuously recovered as vapor from the headspace of the reactor, while the humidifier compensates for the water loss. From raw corn starch as a biomass model, 95 +/- 3, 226 +/- 9, 458 +/- 26, and 509 +/- 64 gl(-1) of ethanol solutions were recovered continuously when the ethanol content in reactor was controlled at 10-20, 30-50, 50-70 and 75-85 g kg-mixture(-1), respectively. The residue showed a lesser volume and higher solid content than that obtained by conventional liquid fermentation. The cost and energy for intensive waste water treatment are decreased, and the continuous fermentation enabled the sustainability of enzyme activity and yeast in the system.

    DOI: 10.1007/s00253-010-2716-y

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  • Molecular Breeding of a Super Yeast for Efficient Bioethanol Production from Waste Clothes at High-Temperature and Low-pH Condition Reviewed

    Minetaka Sugiyama, Yoshio Katakura, Yoshinobu Kaneko, Satoshi Harashima

    SEN-I GAKKAISHI   66 ( 5 )   P159 - P163   2010.5

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    Language:Japanese   Publishing type:Research paper (scientific journal)   Publisher:SOC FIBER SCIENCE TECHNOLOGY  

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  • Lactic acid bacteria display on the cell surface cytosolic proteins that recognize yeast mannan Reviewed

    Yoshio Katakura, Ryosuke Sano, Takashi Hashimoto, Kazuaki Ninomiya, Suteaki Shioya

    Applied Microbiology and Biotechnology   86 ( 1 )   319 - 326   2010.3

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    Fluorescent-labeled invertase, a hyperglycosylated mannoprotein from Saccharomyces cerevisiae, was found to bind to Lactococcus lactis IL1403 at acidic pH. Proteins on the cell wall of the bacterium affinity-purified using invertase as a ligand were identified to be heat shock proteins such as DnaK and GroEL and glycolytic enzymes such as pyruvate kinase and glyceraldehyde-3- phosphate dehydrogenase. DnaK bound to both the bacterium and yeast at pH 4 and aggregated them at above 0.1 mg/ml, whereas no significant difference between the circular dichroism spectra of DnaK at pH 4 and 7 was observed. These results indicate that the cytosolic proteins, including DnaK displayed on the cell wall, cause the lactic acid bacterium to adhere to the yeast. © 2009 Springer-Verlag.

    DOI: 10.1007/s00253-009-2295-y

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    Other Link: http://link.springer.com/article/10.1007/s00253-009-2295-y/fulltext.html

  • Enhanced antibody production following intermediate addition based on flux analysis in mammalian cell continuous culture Reviewed

    Takeshi Omasa, Keisuke Furuichi, Tomoya Iemura, Yoshio Katakura, Michimasa Kishimoto, Ken-ichi Suga

    BIOPROCESS AND BIOSYSTEMS ENGINEERING   33 ( 1 )   117 - 125   2010.1

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    Generally, mammalian cells utilize glucose and glutamine as primary energy sources. To investigate the effect of energy sources on metabolic fluxes and antibody production, glucose- or glutamine-limited serum-free continuous culture of hybridoma 3A21 cells, which produce anti-ribonuclease A antibody, was carried out. The cell volume and dry cell weight were evaluated under various steady-state conditions. The specific consumption and production rates were evaluated on the basis of dry cell weight. On the basis of these results, the fluxes of the metabolic pathway were calculated. It was found that increasing the specific growth rate causes the specific ATP and antibody production rates to decrease. The fluxes between malate and pyruvate also decreased with the increase in specific growth rate. To increase the ATP production rate under steady-state conditions by the enhancement of fluxes between malate and pyruvate, the reduced metabolic fluxes were increased by an intermediate (pyruvate, malate, and citrate) addition. As a result, higher specific ATP and antibody production rates were achieved following the intermediate addition at a constant dilution rate.

    DOI: 10.1007/s00449-009-0351-8

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  • 高温耐性・酸耐性スーパー酵母による廃棄布類からのバイオエタノール生産

    杉山峰崇, 片倉啓雄, 金子嘉信, 原島俊

    繊維学会誌   66, 159-163   2010

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  • Direct immobilization of functional single-chain variable fragment antibodies (scFvs) onto a polystyrene plate by genetic fusion of a polystyrene-binding peptide (PS-tag) Reviewed

    Yoichi Kumada, Kyoko Hamasaki, Yuki Shiritani, Aya Nakagawa, Daisuke Kuroki, Takuhito Ohse, Dong Hwan Choi, Yoshio Katakura, Michimasa Kishimoto

    ANALYTICAL AND BIOANALYTICAL CHEMISTRY   395 ( 3 )   759 - 765   2009.10

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:SPRINGER HEIDELBERG  

    Single-chain Fv antibodies (scFv) genetically fused with polystyrene-binding peptides (PS-tags, (PS19-1; RAFIASRRIRRP, PS19-6; RIIIRRIRR)) were generated by recombinant Escherichia coli for direct and site-specific immobilization of scFv on polystyrene supports with high antigen-binding activity. PS-tag-fused scFvs (scFv-PS-tags) specific for human C-reactive protein (CRP) were successfully over-expressed as an inclusion body and were refolded using the batch-dilution method. When scFv-PS-tags were immobilized on a hydrophilic PS (phi-PS) plate in the presence of Tween 20, they showed high antigen-binding activity comparable to, or greater than, that of a whole monoclonal antibody (mAb) on a hydrophobic PS (pho-PS) plate, which has been the exclusive method for enzyme-linked immunosorbent assay (ELISA). Furthermore, when a scFv-PS-tag was used as a ligand antibody in one-and two-step ELISA, the assay time was reduced without loss of sensitivity. These results indicate that strong and specific attachment of PS-tags onto the phi-PS surface prevented scFv conformational changes and consequently, the high antigen-binding activities of scFvs were preserved. Nearly identical results were obtained by use of PS-tag-fused scFvs with different VH/VL pairs. Therefore, a variety of scFvs could be functionalized onto phi-PS plates by genetic fusion of PS-tags. ScFv-PS-tags, which possess high antigen-binding activity on the phi-PS plate, are more useful ligand antibodies than whole mAbs. Thus, scFv-PS-tags are applicable in both clinical diagnosis and proteomic research.

    DOI: 10.1007/s00216-009-2999-y

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  • Proteomic analysis of responses to osmotic stress in laboratory and sake-brewing strains of Saccharomyces cerevisiae Reviewed

    Takashi Hirasawa, Kazuyuki Yamada, Keisuke Nagahisa, Thai Nho Dinh, Chikara Furusawa, Yoshio Katakura, Suteaki Shioya, Hiroshi Shimizu

    PROCESS BIOCHEMISTRY   44 ( 6 )   647 - 653   2009.6

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    The difference in responses to osmotic stress between the laboratory and sake-brewing strains of Saccharomyces cerevisiae at the translational level was compared by two-dimensional polyacrylamide gel electrophoresis. Proteins, whose production was significantly changed by the osmotic stress, were identified by peptide mass fingerprinting. In the laboratory strain, translation of Hor2p, the protein responsible for glycerol biosynthesis, and Ald6p, related to acetate biosynthesis, was induced under high osmotic pressure conditions. In addition, production of proteins related to translation and stress response was also changed under this condition. On the other hand, in the sake-brewing strain, translation of Hor2p, Hsp26p, and some stress-related proteins was upregulated. The change in the production of enzymes related to glycolysis and ethanol formation was small; however, the production of enzymes related to glycerol formation increased in both strains. These results suggest that enhancement of glycerol formation due to enhancement of the translation of proteins, such as Hor2p, is required for growth of S. cerevisiae under high osmotic pressure condition. This is the first report on the analysis of responses of a sake-brewing strain to high osmotic pressure stress based on proteomics. (C) 2009 Published by Elsevier Ltd.

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  • Effect of CO2 concentration on the growth and exopolysaccharide production of Bifidobacterium longum cultivated under anaerobic conditions Reviewed

    Kazuaki Ninomiya, Kazuhiro Matsuda, Takashi Kawahata, Tadashi Kanaya, Mamiko Kohno, Yoshio Katakura, Masanori Asada, Suteaki Shioya

    JOURNAL OF BIOSCIENCE AND BIOENGINEERING   107 ( 5 )   535 - 537   2009.5

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    For substantial cell growth and exopolysaccharide (EPS) production of Bifidobacterium longum JBL05, anaerobic conditions (dissolved oxygen concentrations below 0.05 ppm) and the supplement Of CO2 (&gt;= 20%) were required. Under these conditions, B. longum JBL05 produced EPS amounts of up to 2.9 g/l. (c) 2009, The Society for Biotechnology, Japan. All rights reserved.

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  • CO2要求性ビフィズス菌における13CO2を用いた代謝解析

    片倉 啓雄, 川畑 隆司, 仁宮 一章, 金谷 忠, 河野 麻美子, 浅田 雅宣, 塩谷 捨明

    化学工学会 研究発表講演要旨集   2009   658 - 658   2009

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    DOI: 10.11491/scej.2009.0.658.0

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  • 乳酸菌Lactococcus lactisのナイシン生合成経路における律速段階の解析

    仁宮 一章, 野口 智子, 片倉 啓雄, 塩谷 捨明

    化学工学会 研究発表講演要旨集   2009   1078 - 1078   2009

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    DOI: 10.11491/scej.2009f.0.1078.0

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  • Characterization of new isolated Ralstonia eutropha strain A-04 and kinetic study of biodegradable copolyester poly(3-hydroxybutyrate-co-4-hydroxybutyrate) production Reviewed

    Suchada Chanprateep, Yoshio Katakura, Sirirat Visetkoop, Hiroshi Shimizu, Songsri Kulpreecha, Suteaki Shioya

    JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY   35 ( 11 )   1205 - 1215   2008.11

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    A new isolated bacterial strain A-04 capable of producing high content of polyhydroxyalkanoates (PHAs) was morphologically and taxonomically identified based on biochemical tests and 16S rRNA gene analysis. The isolate is a member of the genus Ralstonia and close to Ralstonia eutropha. Hence, this study has led to the finding of a new and unexplored R. eutropha strain A-04 capable of producing PHAs with reasonable yield. The kinetic study of poly(3-hydroxybutyrate-co-4-hydroxybutyrate) [P(3HB-co-4HB)] production by the R. eutropha strain A-04 was examined using butyric acid and gamma-hydroxybutyric acid as carbon sources. Effects of substrate ratio and mole ratio of carbon to nitrogen (C/N) on kinetic parameters were investigated in shake flask fed-batch cultivation. When C/N was 200, that is, nitrogen deficient condition, the specific production rate of 3-hydroxybutyrate (3HB) showed the highest value, whereas when C/N was in the range between 4 and 20, the maximum specific production rate of 4-hydroxybutyrate (4HB) was obtained. Thus, the synthesis of 3HB was growth-limited production under nitrogen-deficient condition, whereas the synthesis of 4HB was growth-associated production under nitrogen-sufficient condition. The mole fraction of 4HB units increased proportionally as the ratio of gamma-hydroxybutyric acid in the feed medium increased at any value of C/N ratio. Based on these kinetic studies, a simple strategy to improve P(3HB-co-4HB) production in shake flask fed-batch cultivation was investigated using C/N and substrate feeding ratio as manipulating variable, and was successfully proved by the experiments.

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  • Biological Detoxification of Waste House Wood Hydrolysate Using Ureibacillus thermosphaericus for Bioethanol Production Reviewed

    Naoyuki Okuda, Mayumi Soneura, Kazuaki Ninomiya, Yoshio Katakura, Suteaki Shioya

    JOURNAL OF BIOSCIENCE AND BIOENGINEERING   106 ( 2 )   128 - 133   2008.8

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    Hydrolysates of lignocelluloses hydrolyzed by diluted sulfuric acid contain toxic compounds that inhibit ethanol production by Saccharomyces cerevisiae and the ethanologenic recombinant Escherichia coli KO11. We investigated the biological detoxification of a hydrolysate of waste house wood (WHW) by a thermophilic bacterium, Ureibacillus thermosphaericus. When the hydrolysate was treated with this bacterium at 50 degrees C for 24 h, the ethanol production rate by S. cerevisiae increased markedly and was comparable to that for the hydrolysate treated with an excess amount of calcium hydroxide (overliming). Chromatographic analysis of synthetic hydrolysates containing furfural or 5-hydroxymethyl furfural that are considered to be major toxic compounds in hydrolysates revealed that U. thermosphaericus degrades these compounds. In the WHW hydrolysates, however, the concentrations of these compounds were not decreased markedly by the bacterium. These results suggest that the bacterium degrades minor but more toxic compounds or phenolic compounds in the WHW hydrolysates. The combination of bacterial and overliming treatments of hydrolysates minimized significantly the decrease in ethanol production rate by E. coli KO11 as fermentation proceeded. Because the bacterium grows rapidly and does not consume sugars, our biological detoxification should be useful for bioethanol production from acid hydrolysates of lignocelluloses.

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  • New strategy for enhancement of microbial viability in simulated gastric conditions based on display of starch-binding domain on cell surface Reviewed

    Shirin Tarahomjoo, Yoshio Katakura, Suteaki Shioya

    JOURNAL OF BIOSCIENCE AND BIOENGINEERING   105 ( 5 )   503 - 507   2008.5

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    The C-terminal region of the peptidoglycan hydrolase (CPH) of Lactococcus lactis IL1403 fused to the linker region and the starch-binding domain (SBD) of the a-amylase of Streptococcus bovis 148 was produced intracellularly in Escherichia coli. The fusion protein (CPH-SBD) was able to bind to the cell surface of Lactobacillus casei NRRL B-441 and to corn starch. Therefore, adhesion of cells to corn starch was mediated by the fusion protein. At a cell density of 10(9) cfu/ml and a starch concentration of 5 mg/ml, CPH-SBD-displaying L. casei cells aggregated with corn starch, whereas the free cells of L. casei did not form any aggregates with corn starch. After incubation in simulated gastric juice (pH 3.0, 1 h), the survival percentages of free cells, amylose-coated free cells, and free cells mixed with corn starch were 0.074%, 7.2%, and 3.1% respectively. When CPH-SBD-displaying bacteria aggregated with corn starch, their survival percentage was 8% higher than that of free cells mixed with corn starch. The survival of the amylose-coated CPH-SBD-displaying L. casei cells was comparable to that of amylose-coated free cells, whereas the survival percentage of amylose-coated aggregates of CPH-SBD-displaying bacteria with corn starch was 28% higher than that of amylose-coated mixture of free cells with corn starch. These results demonstrate the potential usefulness of the cell-surface display technique for enhancement of the delivery of viable microorganisms to the intestinal tract.

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  • Rational screening of antibodies and design of sandwich enzyme linked immunosorbant assay on the basis of a kinetic model Reviewed

    Dong Hwan Choi, Yoshio Katakura, Kazuaki Ninomiya, Suteaki Shioya

    JOURNAL OF BIOSCIENCE AND BIOENGINEERING   105 ( 3 )   261 - 272   2008.3

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    A rational strategy for the rapid establishment of a sensitive sandwich enzyme linked immunosorbant assay was developed. The kinetic properties required for the solid-phase and enzyme-conjugated antibodies of sandwich ELISA were determined rationally on the basis of a kinetic model describing antibody-antigen interaction. Some antibodies possessing the required kinetic properties against a model antigen, C-reactive protein (CRP), were successfully isolated from a phage antibody library under the screening conditions that were designed on the basis of simulation results. The best combination of solid-phase and enzyme-conjugated antibodies that gives the most sensitive sandwich ELISA was determined by simulation on the basis of the apparent association and dissociation rate constants of the isolated antibodies. It was confirmed by experiment that the sandwich ELISA using the best combination of antibodies was actually the most sensitive one. Our strategy would be useful for the rapid establishment of sensitive sandwich ELISAs compared with the traditional hybridoma method in which the best condition is determined by trial and error.

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  • Strategies for reducing supplemental medium cost in bioethanol production from waste house wood hydrolysate by ethanologenic Escherichia coli: Inoculum size increase and Coculture with Saccharomyces cerevisiae Reviewed

    Naoyuki Okuda, Kazuaki Ninomiya, Yoshio Katakura, Suteaki Shioya

    JOURNAL OF BIOSCIENCE AND BIOENGINEERING   105 ( 2 )   90 - 96   2008.2

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    In this paper, we report a simultaneous realization of both efficient ethanol production and saving medium nutrient (corn steep liquor ICSL]) during bioethanol fermentation of overliming-treated hydrolysate of waste house wood (WHW) using ethanologenic Escherichia coli K011. In cultivation using WHW hydrolysate supplemented with 4% (v/v) CSL and 0.2 g-dry cell weight (DCW)/l E. coli K011 cells, the overall ethanol yield reached 84% of the theoretical value at 61 h. When we conducted the cultivation with 1% CSL to reduce the supplemental medium cost, the overall ethanol yield remained in the range of 66-72% even at 90 h. We proposed two alternative methods for increasing the overall yield even with 1% CSL. The first method involved increasing the inoculum size of E. coli K011 up to 0.8 g-DCW/l, where 83% of the overall yield was attained at 60 h of cultivation. The second method involved the coculture of 0.2 g-DCW/l E. coli K011 together with 0.02 g-DCW/l of Saccharomyces cerevisiae TJ1, and the overall yield reached 81% at 47 h of cultivation.

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  • Expression of c-terminal repeat region of peptidoglycan hydrolase of Lactococcus lactis IL1403 in methylotrophic yeast Pichia pastoris Reviewed

    Shirin Tarahomjoo, Yoshio Katakura, Suteaki Shioya

    JOURNAL OF BIOSCIENCE AND BIOENGINEERING   105 ( 2 )   134 - 139   2008.2

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    The C-terminal region of the peptidoglycan hydrolase (CPH) of Laetococcus lactis IL1403 produced intracellularly in Escherichia coli was able to attach to the surface of cells of Lactobacillus casei NRRL B-441, Bacillus subtilis 168, E. coli XL1-blue and Saccharomyces cerevisiae IFO0216. Therefore, this domain is a suitable fusion partner for the adhesion of proteins to cell surfaces. The production of cell-surface adhesive proteins using this domain in Pichia pastoris is particularly attractive, because this organism has better capability to allow the correct folding of the recombinant proteins than prokaryotic hosts. However, when this domain is produced in this yeast, its cell-surface binding activity may be limited by glycosylation. In this study, therefore, we constructed a CPH mutant (CPHM) devoid of the potential N-glycosylation sites by site-directed mutagenesis. CPHM was successfully expressed extracellularly in P pastoris (GS115) using the methanol inducible AOX1 promoter with an a-mating factor signal sequence, whereas the native CPH was not produced in this host. Western blot analysis revealed that the apparent molecular size of CPHM was 18 kDa greater than that of CPH produced in E. coli (32 kDa), which is attributed to O-glycosylation. However, CPHM produced in P pastoris was capable of binding to the cell surfaces despite its modification by the yeast, and its dissociation rate constant from the surface of L. casei NRRL B-441 cells was 3.5-fold lower than that of CPH produced in E. coli. These results demonstrate the applicability of the constructed domain (CPHM) for the production of cell-surface adhesive proteins in P pastoris.

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  • Bidirectional cell-surface anchoring function of C-terminal repeat region of peptidoglycan hydrolase of Lactococcus lactis, IL1403 Reviewed

    Shirin Tarahomjoo, Yoshio Katakura, Eiichi Satoh, Suteaki Shioya

    JOURNAL OF BIOSCIENCE AND BIOENGINEERING   105 ( 2 )   116 - 121   2008.2

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    With the aim of constructing an efficient protein display system for lactic acid bacteria (LABs), the effect of fusion direction on the cell-surface binding activity of the C-terminal region of the peptidoglycan hydrolase (CPH) of Lactococcus lactis IL1403 was studied. CPH fused to the a-amylase (AMY) of Streptococcus bovis 148 either at its C-terminus (CPH-AMY) or at its N-terminus (AMY-CPH) was expressed intracellularly in Escherichia coli. This domain was able to direct binding of AMY to the surface of L. lactis ATCC 19435 in both constructs. However, the number of bound molecules per cell and the specific activity for starch digestion in the case of CPH-AMY were 3 and 14 times greater than those in the case of AMY-CPH, respectively. Of the LABs tested, L. lactis ATCC 19435 showed the highest binding capability for CPH-AMY, up to 6 x 10(4) molecules per cell, with a dissociation rate constant of 5.00 x 10(-5) s(-1). The binding of CPH-AMY to the surface of Lactobacillus delbrueckii ATCC 9649 cells was very stable with a dissociation rate constant of 6.96 x 10(-6) s(-1). The production of CPH-AMY in the soluble form increased 3-fold as a result of coexpression with a molecular chaperone, trigger factor. The results of this study suggest the usefulness of CPH as a bidirectional anchor protein for the production of cell-surface adhesive enzymes in E. coli. Furthermore, the importance of the fusion direction of CPH in determining cell-surface binding and enzymatic activities was shown.

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  • 自立配向性モノクローナル抗体を用いた革新的イムノアッセイ技術の開発

    熊田 陽一, 濱崎 今日子, 尻谷 優希, 大瀬 琢人, 片倉 啓雄, 中西 一弘, 岸本 通雅

    化学工学会 研究発表講演要旨集   2008   727 - 727   2008

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    DOI: 10.11491/scej.2008f.0.727.0

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  • 乳酸菌Lactococcus lactisのナイシン生合成経路における律速段階の解析

    野口 智子, 森脇 久美子, Cahyani A. D., 仁宮 一章, 片倉 啓雄, 塩谷 捨明

    化学工学会 研究発表講演要旨集   2008   986 - 986   2008

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  • 基質認識ペプチドの付加によるポリ乳酸分解酵素の比活性の向上

    住谷 昌美, 菅江 理子, 仁宮 一章, 片倉 啓雄, 中島 敏明, 塩谷 捨明

    化学工学会 研究発表講演要旨集   2008   416 - 416   2008

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    DOI: 10.11491/scej.2008.0.416.0

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  • 乳酸菌表層提示系構築のための新規アンカータンパク質の探索と評価

    高野 真, 上條 敦史, 仁宮 一章, 片倉 啓雄, 塩谷 捨明

    化学工学会 研究発表講演要旨集   2008   415 - 415   2008

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    DOI: 10.11491/scej.2008.0.415.0

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  • 蛍光標識cellulose binding domainを用いたリグノセルロース系バイオマス前処理プロセスの評価

    辻林 宏章, 森岡 こころ, 福井 純一, 仁宮 一章, 片倉 啓雄, 塩谷 捨明

    化学工学会 研究発表講演要旨集   2008   389 - 389   2008

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    DOI: 10.11491/scej.2008.0.389.0

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  • Continuous recovery of ethanol from solid state fermentation of biomass

    Moukamnerd C.

    2008   993 - 993   2008

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    DOI: 10.11491/scej.2008f.0.993.0

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  • Identification of target genes conferring ethanol stress tolerance to Saccharomyces cerevisiae based on DNA microarray data analysis Reviewed

    Takashi Hirasawa, Katsunori Yoshikawa, Yuki Nakakura, Keisuke Nagahisa, Chikara Furusawa, Yoshio Katakura, Hiroshi Shimizu, Suteaki Shioya

    JOURNAL OF BIOTECHNOLOGY   131 ( 1 )   34 - 44   2007.8

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    During industrial production process using yeast, cells are exposed to the stress due to the accumulation of ethanol, which affects the cell growth activity and productivity of target products, thus, the ethanol stress-tolerant yeast strains are highly desired. To identify the target gene(s) for constructing ethanol stress tolerant yeast strains, we obtained the gene expression profiles of two strains of Saccharomyces cerevisiae, namely, a laboratory strain and a strain used for brewing Japanese rice wine (sake), in the presence of 5% (v/v) ethanol, using DNA microarray. For the selection of target genes for breeding ethanol stress tolerant strains, clustering of DNA microarray data was performed. For further selection, the ethanol sensitivity of the knockout mutants in each of which the gene selected by DNA microarray analysis is deleted, was also investigated. The integration of the DNA microarray data and the ethanol sensitivity data of knockout strains suggests that the enhancement of expression of genes related to tryptophan biosynthesis might confer the ethanol stress tolerance to yeast cells. Indeed, the strains overexpressing tryptophan biosynthesis genes showed a stress tolerance to 55 ethanol. Moreover, the addition of tryptophan to the culture medium and overexpression of tryptophan permease gene conferred ethanol stress tolerance to yeast cells. These results indicate that overexpression of the genes for trypophan biosynthesis increases the ethanol stress tolerance. Tryptophan supplementation to culture and overexpression of the tryptophan permease gene are also effective for the increase in ethanol stress tolerance. Our methodology for the selection of target genes for constructing ethanol stress tolerant strains, based on the data of DNA microarray analysis and phenotypes of knockout mutants, was validated. (c) 2007 Elsevier B.V. All rights reserved.

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  • Metabolic pathway recruiting through genomic data analysis for industrial application of Saccharomyces cerevisiae Reviewed

    Suteaki Shioya, Hiroshi Shimizu, Takashi Hirasawa, Keisuke Nagahisa, Chikara Furusawa, Gaurav Pandey, Yoshio Katakura

    BIOCHEMICAL ENGINEERING JOURNAL   36 ( 1 )   28 - 37   2007.8

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    This paper aims to establish the methodology for building object-oriented metabolic pathway models which describe metabolic flux change due to the cultivation conditions change such as from normal one to high osmotic pressure (sugar concentration) based on the genomic data analysis, and also to apply the method for metabolic pathway recruiting in an improved strain producing useful compounds which can play important roles for green chemistry. The model will be developed using the data of transcriptome, proteome and metabolites, including metabolic flux analysis. Practically, profiling data of transcriptome and proteome have been taken at high osmolarity condition. And a better-improved strain based on the analysis was obtained. (c) 2006 Elsevier B.V. All rights reserved.

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  • Fed-batch coculture of Lactobacillus kefiranofaciens with Saccharomyces cerevisiae for effective production of kefiran Reviewed

    Shiori Tada, Yoshio Katakura, Kazuaki Ninomiya, Suteaki Shioya

    JOURNAL OF BIOSCIENCE AND BIOENGINEERING   103 ( 6 )   557 - 562   2007.6

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    In a batch coculture of kefiran-producing lactic acid bacteria Lactobacillus kefiranofaciens and lactate-assimilating yeast Saccharomyces cerevisiae, lactate accumulation in the medium was observed, which inhibited kefiran production. To enhance kefiran productivity by preventing lactate accumulation, we conducted lactose-feeding batch operation with feedforward/feedback control during the coculture, so that the lactate production rate of L. kefiranofaciens was balanced with the lactate consumption rate of S. cerevisiae. The lactate concentration was maintained at less than 6 g V throughout the fed-batch coculture using a 5 l jar fermentor, although the concentration reached 33 g l(-1) in the batch coculture. Kefiran production was increased to 6.3 g in 102 h in the fed-batch coculture, whereas 4.5 g kefiran was produced in 97 It in the batch coculture. The kefiran yield on lactose basis was increased up to 0.033 g g(-1) in the fed-batch coculture, whereas that in the batch coculture was 0.027 g g(-1).

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  • Extracting the hidden features in saline osmotic tolerance in Saccharomyces cerevisiae from DNA microarray data using the self-organizing map: biosynthesis of amino acids Reviewed

    Gaurav Pandey, Katsunori Yoshikawa, Takashi Hirasawa, Keisuke Nagahisa, Yoshio Katakura, Chikara Furusawa, Hiroshi Shimizu, Suteaki Shioya

    APPLIED MICROBIOLOGY AND BIOTECHNOLOGY   75 ( 2 )   415 - 426   2007.5

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    During saline stress, Saccharomyces cerevisiae changes its metabolic fluxes through the direct accumulation of metabolites such as glycerol and trehalose, which in turn provide tolerance to the cell against stress. Previous research shows that the various controls at both transcriptional and translational levels decide the phenomenon of stress, but details about such transition is still not very clear. This paper attempts to extract some hidden features through the information extraction approach from DNA microarray data during transition to osmotic tolerance, which are expected to be important in directing to the tolerance stage upon encountering osmotic stress in yeast. Time course of DNA microarray data during osmotic tolerance was analyzed by computational approach 'self-organizing map (SOM) extended with hierarchical clustering'. Since eukaryotic gene expression is governed by short regulatory sequences found upstream in promoter regions, therefore clusters containing the similar profiles obtained by SOM were further analyzed for overrepresentation of known regulatory binding sites in promoter region. It was found that apart from known and expected 'STRE' during osmotic stress, the 'GCN4' binding site is also found to be significant. Hence, it was suggested that the process of osmotic tolerance proceeds through a stage of amino acid starvation. The intracellular amino acids pool also found to be depleted during transition and restoration is faster in brewing strain than laboratory strain. Experiments involving supplementation of amino acids helps in reducing the lag time for recovery, which was found to be similar to that of brewing strain.

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  • Simulation model for predicting limit of detection and range of quantitation of competitive enzyme-linked immunosorbent assay Reviewed

    Dong Hwan Choi, Yoshio Katakura, Rieko Matsuda, Yuzuru Hayashi, Kazuaki Ninomiya, Suteaki Shioya

    JOURNAL OF BIOSCIENCE AND BIOENGINEERING   103 ( 5 )   427 - 431   2007.5

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    The limit of detection (LOD) and range of quantitation (ROQ) of competitive enzyme-linked immunosorbent assay (ELISA) were determined from a model describing the calibration curve and precision profile of the assay. The calibration curve is given by solving the differential equations describing the change in the concentrations of an antigen-antibody complex and an enzyme-conjugated antigen-antibody complex by a Runge-Kutta method. The precision profile is described in terms of possible error sources such as the pipetting volumes of the analyte, enzyme-conjugated antigen, antibody and substrate solutions, calibration curve and inherent absorbances between the wells in an ELISA plate. An appropriate concentration of the enzyme-conjugated antigen that balances a low detection limit and sufficient color development was found to be in a narrow range, which is consistent with the empirical rule. The optimum conditions for competitive ELISA using an antibody with a kinetic property can be designed from our model.

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  • Enhancement of 1,4-dihydroxy-2-naphthoic acid production by Propionibactetium freudenreichii ET-3 fed-batch culture Reviewed

    Keisuke Furuichi, Yoshio Katakura, Kazuaki Ninomiya, Suteaki Shioya

    APPLIED AND ENVIRONMENTAL MICROBIOLOGY   73 ( 10 )   3137 - 3143   2007.5

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    The production of 1,4-dihydroxy-2-naphthoic acid (DHNA) was investigated using a fed-batch culture of Propionibacterium freudenreichii ET-3. DHNA is a precursor of menaquinone (MK) and is transformed to MK by combination with an isoprenoid unit. We found that ET-3 stopped MK production and increased DHNA production in an anaerobic fed-batch culture by maintaining the lactose concentration at approximately zero. The maximum DHNA concentration observed in the anaerobic fed-batch culture was markedly higher than the maximum DHNA concentration observed in an anaerobic batch culture. Moreover, MK or DHNA production was affected by the lactose feeding rate; this suggests that lactose metabolism participates in the syntheses of these products. On the other hand, accumulation of propionate was found to inhibit DHNA production in the fed-batch culture. Based on the fact that ET-3 increases DHNA production in an aerobic culture by consuming propionate, we carried out a cultivation experiment in which an anaerobic fed-batch culture was switched to an anaerobic batch culture and found that the DHNA production was increased to a greater extent than the DHNA production in an anaerobic fed-batch culture. These results suggest that DHNA production by ET-3 is markedly influenced by carbon source limitation and the oxygen supply.

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  • Microaeration enhances productivity of bioethanol from hydrolysate of waste house wood using ethanologenic Escherichia coli KO11 Reviewed

    Naoyuki Okuda, Kazuaki Ninomiya, Masako Takao, Yoshio Katakura, Suteaki Shioya

    JOURNAL OF BIOSCIENCE AND BIOENGINEERING   103 ( 4 )   350 - 357   2007.4

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    This is the first study showing the successful application of waste house wood (WHW) to the pilot-scale production of bioethanol by hydrolysis using diluted acid and fermentation using the ethanologenic recombinant Escherichia coli KO11. The major sugars in the WHW hydrolysate were glucose, mannose and xylose; the percentages were approximately 35%, 35% and 20% (w/w), respectively. In anaerobic fermentation using a 5-l reactor in which the oxygen transfer rate (OTR) was 0 mmol/(l. h), KO11 consumed only 25% of the xylose in the WHW hydrolysate over the examined fermentation time of 100 h; however, hexoses such as glucose and mannose were consumed completely. Microaeration at an OTR of 4 mmol/(l-h) enhanced the xylose utilization ratio of KO11 to 100%, at which the ethanol concentration was 35.4 g/l and the ethanol yield was 0.42, although the maximum ethanol concentrations were 28.8 and 26.6 g/l at OTRs of 0 mmol/(l. h) and 15 mmol/(l. h), respectively. Moreover, this microaerobic fermentation at OTR of 4 mmol/(l.h) was applied to 1000-l scale bioethanol production using the WHW hydrolysate. The xylose utilization ratio reached 100% and the ethanol yield was determined to be 0.45 for a 63-h fermentation, which were comparable to those obtained from the laboratory-scale fermentation.

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  • Validation of a method for predicting the precision, limit of detection and range of quantitation in competitive ELISA Reviewed

    Dong Hwan Choi, Yoshio Katakura, Rieko Matsuda, Yuzuru Hayashi, Masato Hirobe, Yasuhiro Goda, Kazuaki Ninomiya, Suteaki Shioya

    ANALYTICAL SCIENCES   23 ( 2 )   215 - 218   2007.2

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    The mathematical model for predicting the precision, limit of detection (LOD) and range of quantitation (ROQ) in a competitive enzyme-linked immunosorbent assay (ELISA) proposed by Hayashi et al. (Anal. Chem., 2004, 76, 1295) was validated. The model describes the relative standard deviation (RSD) of concentration estimates by the RSDs of pipetting volumes of analyte, enzyme-conjugated antigen, antibody and substrate solutions, and the standard deviation (SD) of inherent absorbances between the wells in an ELISA plate. For 6 kinds of direct competitive ELISA kits, the LOD and ROQ predicted by the model agreed well with those obtained by experiments with real samples. It was also confirmed that the model is applicable to the prediction of uncertainty that depends on the pipetting error of the viscous antiserum solution. The model was demonstrated to be useful for estimating the LOD and ROQ of competitive ELISA.

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  • Enhancement of ethanol production by promoting surface contact between starch granules and arming yeast in direct ethanol fermentation Reviewed

    Teik Seong Khaw, Yoshio Katakura, Kazuaki Ninomiya, Churairat Moukamnerd, Akihiko Kondo, Mitsuyoshi Ueda, Suteaki Shioya

    JOURNAL OF BIOSCIENCE AND BIOENGINEERING   103 ( 1 )   95 - 97   2007.1

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    The specific ethanol production rate of raw starch by arming yeast cells displaying a-amylase and glucoamylase increased significantly when the cells and starch granules settled together. The specific ethanol production rate also increased when the size distribution of starch granules was almost same as that of the yeast cells. These results indicate that the surface contact between starch granules and yeast cells is important for increasing the apparent specific activity of alpha-amylase, which was the rate-limiting factor of the direct fermentation.

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  • Comparison of transcriptional responses to osmotic stresses induced by NaCl and sorbitol additions in Saccharomyces cerevisiae using DNA microarray Reviewed

    Takashi Hirasawa, Kengo Ashitani, Katsunori Yoshikawa, Keisuke Nagahisa, Chikara Furusawa, Yoshio Katakura, Hiroshi Shimizu, Suteaki Shioya

    JOURNAL OF BIOSCIENCE AND BIOENGINEERING   102 ( 6 )   568 - 571   2006.12

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    Transcriptional responses of laboratory and brewing strains of Saccharomyces cerevisiae to osmotic stresses induced by adding either NaCl or sorbitol to their cultures were compared by clustering DNA microarray data. Our results suggest that the difference in the transcriptional responses of the two strains between NaCl and sorbitol additions is small when the dynamics of the total change in gene expression are similar.

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  • Effect of flocculation on performance of arming yeast in direct ethanol fermentation Reviewed

    Khaw Teik Seong, Yoshio Katakura, Kazuaki Ninomiya, Yohei Bito, Satoshi Katahira, Akihiko Kondo, Mitsuyoshi Ueda, Suteaki Shioya

    APPLIED MICROBIOLOGY AND BIOTECHNOLOGY   73 ( 1 )   60 - 66   2006.11

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    In the direct ethanol fermentation of raw starch by arming yeast with alpha-amylase and glucoamylase, it is preferable to use a flocculent yeast because it can be recovered without centrifugation. Three types of arming yeast system, I (nonflocculent), II (mildly flocculent), and III (heavily flocculent), were constructed and their fermentation performances were compared. With an increase in the degree of flocculation, specific ethanol production rate for soluble starch decreased (0.19, 0.17, and 0.12 g g-dry-cell(-1) h(-1) for systems I, II, and III, respectively), but that for raw starch did not decrease as much as expected (0.06, 0.06, and 0.04 g g-dry-cell(-1) h(-1) for systems I, II and III, respectively). Microscopic observation revealed that many starch granules were captured in the yeast flocs in system III during the direct ethanol fermentation of raw starch. It was suggested that the capture of starch granules increases apparent substrate concentration for amylolytic enzymes in arming yeast cell flocs; thus, the specific ethanol production rate of system III was kept at a level comparable to those of the other systems.

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  • Optimal aerobic cultivation method for 1,4-dihydroxy-2-naphthoic acid production by Propionibacterium freudenreichii ET-3 Reviewed

    Keisuke Furuichi, Atsuko Arnano, Yoshio Katakura, Kazuaki Ninomiya, Suteaki Shioya

    JOURNAL OF BIOSCIENCE AND BIOENGINEERING   102 ( 3 )   198 - 205   2006.9

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    To investigate the effects of oxygen supply on Propionibacterium freudenreichii ET-3 metabolism and 1,4-dihydroxy-2-naphthoic acid (DHNA) production in detail, the strain was cultured by switching from anaerobic condition to aerobic condition at 72 h (termed anaerobic-aerobic switching culture hereafter) employing different oxygen transfer rates (OTRs) in the range of 0.08-0.90 mg/(l(.)h). It was found that a 0.08 mg/(l(.)h) OTR could not change the metabolism or improve the DHNA production of P.freudenreichii ET-3. When the OTR was in the range of 0.23-0.66 mg/(l. h), propionate, which inhibits DHNA production significantly, was consumed during the aerobic phase. Final DHNA concentration increased to 0.22 mM, irrespective of OTR. When the OTR was 0.90 mg/(l(.)h), a sudden increase in dissolved oxygen (DO) concentration during the aerobic phase resulted in a sudden decrease in DHNA concentration. To attenuate the stresses caused by propionate and oxygen exposure, we designed an optimal cultivation in which the anaerobic and aerobic phases were repeated three times alternately. As a result, propionate concentration was maintained below the level that inhibits DHNA production, and no DO concentration was detected throughout the culture. The final DHNA concentration in this culture was 0.33 mM, which is 2.7-fold that in the anaerobic culture and 1.5-fold that in the anaerobic-aerobic switching culture.

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  • Aerobic culture of Propionibacterium freudenreichii ET-3 can increase production ratio of 1,4-dihydroxy-2-naphthoic acid to menaquinone Reviewed

    Keisuke Furuichi, Ken-ichi Hojo, Yoshio Katakura, Kazuaki Ninomiya, Suteaki Shioya

    JOURNAL OF BIOSCIENCE AND BIOENGINEERING   101 ( 6 )   464 - 470   2006.6

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    This is the first report on the production of both 1,4-dihydroxy-2-naphthoic acid (DHNA) and menaquinone by Propionibacterium freudenreichii ET-3. DHNA can be a stimulator of bifidogenic growth, and menaquinone has important roles in blood coagulation and bone metabolism. During anaerobic culture, DHNA and menaquinone concentrations reached 0.18 mM and 0.12 mM, respectively. The molar ratio between these products was approximately 3:2, which was not affected by culture pH and temperature over the ranges of 6.0-7.0 and 31-35 degrees C, respectively. As for organic acid, propionate and acetate accumulated at concentrations of 0.3 M and 0.15 M, respectively, and the propionate accumulation particularly inhibited further production of DHNA. To improve DHNA production, we switched from anaerobic condition to aerobic condition during the culture when lactose was depleted. DHNA concentration continued to increase even after lactose exhaustion, reaching 0.24 mM. In contrast to DHNA production, menaquinone production stopped after the switch to aerobic condition. The total molar production of DHNA and menaquinone was 0.3 mM irrespective of aerobic culture and anaerobic-aerobic switching culture. Therefore, the anaerobic-aerobic switching culture could increase the production ratio of DHNA to menaquinone. The DHNA concentration obtained from the anaerobic-aerobic switching culture was 1.3-fold higher than that in the anaerobic culture, because P. freudenreichii ET-3 utilized propionate accumulated in the medium via the reversed methylmalonyl CoA pathway under aerobic condition. The culture method proposed in this study could be applicable to industrial-scale fermentation using 1000 1 of media, by which 0.23 mM DHNA was produced.

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  • Evaluation of performance of different surface-engineered yeast strains for direct ethanol production from raw starch Reviewed

    Teik Seong Khaw, Yoshio Katakura, Jun Koh, Akihiko Kondo, Mitsuyoshi Ueda, Suteaki Shioya

    Applied Microbiology and Biotechnology   70 ( 5 )   573 - 579   2006.5

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    DOI: 10.1007/s00253-005-0101-z

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  • Comparative analysis of transcriptional responses to saline stress in the laboratory and brewing strains of Saccharomyces cerevisiae with DNA microarray Reviewed

    T. Hirasawa, Y. Nakakura, K. Yoshikawa, K. Ashitani, K. Nagahisa, C. Furusawa, Y. Katakura, H. Shimizu, S. Shioya

    Applied Microbiology and Biotechnology   70 ( 3 )   346 - 357   2006.4

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    DOI: 10.1007/s00253-005-0192-6

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  • 水生植物のコンポスト化反応を再構成できる2種の微生物について

    森岡 こころ, 川上 晋平, 仁宮 一章, 片倉 啓雄, 塩谷 捨明

    化学工学会 研究発表講演要旨集   2006   931 - 931   2006

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    DOI: 10.11491/scej.2006f.0.931.0

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  • 酵母との共培養による乳酸菌のケフィラン生産性の向上

    片倉 啓雄, 夛田 志緒里, 佐野 良介, 仁宮 一章, 塩谷 捨明

    化学工学会 研究発表講演要旨集   2006   1005 - 1005   2006

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    DOI: 10.11491/scej.2006f.0.1005.0

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  • 2H14-1 Simulation and precision analysis in competitive ELISA based on a kinetic model

    CHOI Dong Hwan, KATAKURA Yoshio, NINOMIYA Kazuaki, MATSUDA Rieko, HAYASHI Yuzuru, SHIOYA Suteaki

    日本生物工学会大会講演要旨集   17   223 - 223   2005.9

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  • DNA microarray analysis on Saccharomyces cerevisiae under high carbon dioxide concentration in fermentation process Reviewed

    K Nagahisa, T Nakajima, K Yoshikawa, T Hirasawa, Y Katakura, C Furusawa, S Shioya, H Shimizu

    BIOTECHNOLOGY AND BIOPROCESS ENGINEERING   10 ( 5 )   451 - 461   2005.9

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    The effect of carbon dioxide on yeast growth was investigated during the cultivation of pH 5.0 and pH 6.8, by replacing the nitrogen part with carbon dioxide under aerobic conditions. The values of the specific growth rate under pH 5.0 and pH 6.8 conditions became 64.0% and 46.9%, respectively, compared to those before the change in gas composition. This suggests that the effect of carbon dioxide was greater pronounced in pH 6.8 than in pH 5.0. The genome-wide transcriptional response to elevated carbon dioxide was examined using a DNA microarray. As for upregulated genes, it was noteworthy that 3 genes were induced upon entry into a stationary phase and 6 genes were involved in stress response. Of 53 downregulated genes, 22 genes were involved in the ribosomal biogenesis and assembly and 5 genes were involved in the lipid metabolism. These facts suggest that carbon dioxide could bring the cell conditions partially to a stationary phase. The ALD6 gene encoding for cytosolic acetalclehyde dehydrogenase was downregulated, which would lead to a lack of cell components for the growth. The downregulation of ALD6 was greater in pH 6.8 than in pH 5.0, consistent with physiological response. This suggests that it might be the most effective factor for growth inhibition.

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  • Effect of sulfur sources on specific desulfurization activity of Rhodococcus erythropolis KA2-5-1 in exponential fed-batch culture Reviewed

    M Konishi, K Kishimoto, T Omasa, Y Katakura, S Shioya, H Ohtake

    JOURNAL OF BIOSCIENCE AND BIOENGINEERING   99 ( 3 )   259 - 263   2005.3

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    The effects of sulfur sources on the desulfurization activity of Rhodococeus erythropolis KA2-5-1 were investigated by using an exponential fed-batch culture technique. The feed rate of a sulfur source was controlled independently of the feed rate of ethanol, which was used as a carbon and energy source. Among the sulfur sources examined were dibenzothiophene (DBT), ammonium sulfate, (L)-cysteine, (L)-methionine, and 2-amino-ethanesulfonic acid. When the fed-medium contained DBT as the sole sulfur source, KA2-5-1 cells showed a maximum desulfurization activity of approximately 130 mmol 2-HBP kg-cell(-1)h(-1). Similar levels of enzyme activity were also achieved with inexpensive ammonium sulfate by using the exponential fed-batch culture technique. In addition, higher levels of desulfurization activity were achieved by increasing the dosage of the DBT desulfurization (dsz) operon and dszD gene in R. erythropolis KA2-5-1. The recombinant strain showed a maximum desulfurization activity of approximately 250 mmol 2-HBP kg-cell(-1)h(-1) in the exponential fed-batch cultures.

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  • Construction and evaluation of drug-metabolizing cell line for bioartificial liver support system Reviewed

    T Omasa, K Kim, S Hiramatsu, Y Katakura, M Kishimoto, S Enosawa, H Ohtake

    BIOTECHNOLOGY PROGRESS   21 ( 1 )   161 - 167   2005.1

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    Focusing on drug metabolism in liver, we constructed and evaluated a drug-metabolizing bioartificial liver (BAL) support system. In a previous study, we constructed ammonia-metabolizing CHO and hepatoma-derived HepG2 cell lines by recombination of the glutamine synthetase (GS) gene. For further mimicking of liver metabolism, the human hepatoma-derived cell line HepG2 was transformed by the pBudCE-GS-CYP3A4 vector, which contains GS and drug-metabolizing CYP 3A4 genes. The constructed GS-3A4-HepG2 cell line showed 3A4 activity higher than that of human primary hepatocytes. The drug-metabolizing activity of BAL (BAL clearance) was evaluated using this cell line. The estimated clearance was higher than that of the human hepatocyte system.

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  • 競合ELISA法のシミュレーションと精度の予測

    片倉 啓雄, 崔 東煥, 仁宮 一章, 松田 りえ子, 林 譲, 塩谷 捨明

    化学工学会 研究発表講演要旨集   2005   313 - 313   2005

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    DOI: 10.11491/scej.2005.0.313.0

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  • Expression and amplification of glutamine synthetase gene endows HepG2 cells with ammonia-metabolizing activity for bioartificial liver support system Reviewed

    T Omasa, M Yamanaka, N Tanimura, Y Katakura, M Kishimoto, K Suga, S Enosawa

    ENZYME AND MICROBIAL TECHNOLOGY   35 ( 6-7 )   519 - 524   2004.12

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    To establish the ammonia-metabolizing cell lines for a bioartificial liver support system, CHO-K1 and HepG2 were transformed with pBK-CMV-GS vector that contains glutamine synthetase (gs) gene. The recombinant cell lines were selected under the various concentrations of glutamine synthetase inhibitor, methionine sulfoximine (MSX). The host CHO-K1 and HepG2 cell lines produces ammonia, but the both MSX tolerable CHO (GS-CHO) and HepG2 (GS-HepG2) cell lines endowed with the high GS activity could metabolize the ammonium from medium. The ammonia-metabolizing activity of CHO and HepG2 cell was about one-fourth of that of primary hepatocyte. (C) 2004 Elsevier Inc. All rights reserved.

    DOI: 10.1016/j.enzmictec.2004.08.027

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  • A practical kinetic model for efficient isolation of useful antibodies from phage display libraries Reviewed

    Y Katakura, GQ Zhuang, T Nakatani, T Furuta, T Omasa, M Kishimoto, K Suga, S Shioya

    JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC   28 ( 4-6 )   191 - 200   2004.6

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    To isolate phages displaying a practical and useful antibody with a high k(on) value and/or a low k(off) value from phage display antibody libraries, we developed a rational strategy based on a kinetic model. In the model, the recovery of a phage displaying an antibody after a round of biopanning is expressed as a function of five parameters, the apparent association rate constant of the phage antibody to the immobilized antigen (k(on)'), the apparent dissociation rate constant of the phage antibody from the immobilized antigen (k(off)'), the effective antigen concentration (C), the time for the binding process (t(b)) and the time for the washing process (t(w)). An optimum set of operating parameters (C, t(b) and t(w)) for isolating phages displaying an antibody with a high km value was designed based on the model. Three rounds of biopanning were carried out under the designed conditions, against a phage library in which the hypervariable regions of an original antibody were randomized. All isolated phages displayed an antibody with a higher k(on) value and one displayed an antibody with a 30-fold greater km value than that of the original antibody. Experimental conditions which improve the efficiency of conventional off-rate selections are also described. (C) 2004 Elsevier B.V. All rights reserved.

    DOI: 10.1016/j.molcatb.2004.02.016

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  • Rapid Construction of Gene-Amplified CHO Cell Line by Gene Targeting

    Omasa Takeshi, Kajita Mihoko, Yoshikawa Tomohiro, Katakura Yoshio, Kishimoto Michimasa, Ohtake Hisao

    Asian Pacific Confederation of Chemical Engineering congress program and abstracts   2004   488 - 488   2004

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    Gene amplification has been developed as an indispensable technique for the bio-pharmaceutical production by recombinant mammalian cells. The most commonly used technique is likely dihydroforate reductase (<I>dhfr</I>) gene amplification system in Chinese hamster ovary (CHO) cell line. In this gene amplification system, high productive CHO cells can be selected by "time-consuming" stepwise increases of methotrexiate (MTX) concentration in culture medium. However, it is of great significance to shorten the time for constructing the stable and productive recombinant CHO cell line in the industrial process. In this study, we focused on a rapid construction method for gene-amplified cell line. We employed the human granulocyte-macrophage colony stimulating factor (hGM-CSF) as a model of glycoprotein and investigated the relationship among the productivity and stability of amplified gene, the location of the amplified gene and the MTX concentration. The distribution of amplified gene on the chromosome was analyzed using fluorescence <I>in situ</I> hybridization (FISH). Based on the FISH image analysis, we speculated the specific chromosome location suitable for gene amplification.

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  • Metabolic Systems Analysis at a Key Branch Point of Glutamate Production by Coryneform Bacteria

    Shimizu Hiroshi, Shirai Tomokazu, Kuzumoto Masanori, Hirasawa Takashi, Katakura Yoshio, Nagahisa Keisuke, Furusawa Chikara, Shioya Suteaki

    Asian Pacific Confederation of Chemical Engineering congress program and abstracts   2004   423 - 423   2004

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    To improve metabolic pathways for enhancement of a targeted product systematically, quantitative systems analysis in bionetworks of gene, protein, and metabolic pathways is highly desired. Quantification of effect of perturbation of genes and proteins on metabolic fluxes enables to elucidate the parameters responsible for the control of flux in metabolic pathways. In this study, mechanism of flux redistribution at a key branch point in glutamate production by coryneform bacteria, <I>Corynebacterium glutamicum</I> and <I>Corynebacterium efficiens</I> is studied. The quantitative analysis at a key branch point, namely, 2-oxoglutarate(αKG), was performed by comparison of flux distribution before and after addition of the triggering operations such as depletion of biotin and addition of Tween 40. The flux redistribution from the central pathway to glutamate synthetic pathway obviously occurred after the decrease in activity of 2-oxoglutarate dehydrogenase complex, ODHC, while activities of other enzymes at the branch point of isocitrate dehydrogenase, ICDH, and glutamate dehydrogenase, GDH, were not significantly changed. The comparative studies on flux distribution of a wild type strain of <I>C. glutamicum</I> and two genetically engineered strains which harbor a plasmid with genes encoding ICDH and GDH, respectively, also reached the same conclusion that the ODHC is the most crucial factor for the control of flux distribution at the 2-oxoglutarate branch point. The difference in glutamate production between <I>C. glutamicum</I> and <I>C. efficiens</I> is due to a result of the difference in the degree of decrease in ODHC activity. A model with kinetic parameters well explained the phenomena of flux redistribution at the 2-oxoglutarate branch point and predicted flux redistribution.

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  • Rational Design of Metabolic Pathway Improvement based on DNA Microarray Data in Yeast

    Hirasawa Takashi, Nakakura Yuki, Hui Zhao, Nagahisa Keisuke, Katakura Yoshio, Shimizu Hiroshi, Shioya Suteaki

    Asian Pacific Confederation of Chemical Engineering congress program and abstracts   2004   422 - 422   2004

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    Growth properties and gene expression profiles by using slide glass-based DNA microarray under high osmotic pressure condition (addition of NaCl) were compared between the two yeast strains, a laboratory strain and a brewing one used for Japanese rice wine (sake) brewing. Growth properties in both strains after addition of 1 M of NaCl revealed that the brewing strain was more tolerant to osmotic stress than the laboratory one. DNA microarray analysis data indicated that the genes encoding the enzymes involved in acetate, glycerol and trehalose synthetic pathways were up-regulated in both strains under the stress conditions. Moreover, genes encoding sodium ion pump and cupper ion-binding proteins were more up-regulated in brewing strain than in the laboratory strain. Up-regulation of these genes might characterize the osmotic stress-tolerance of the brewing strain. We constructed a glycerol-overproducing strain by expressing <I>GPD1</I> gene encoding glycerol-3-phosphate dehydrogenase constitutively in the laboratory strain and evaluated the osmotic stress tolerance of this strain. This improved strain showed more tolerant to osmotic stress than the parent strain, but glycerol was immediately exported outside of the cells. We are constructing further improved strain by disrupting the gene encoding glycerol exporter protein and we will evaluate again the stress tolerance of this strain.

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  • Metabolic Pathway Recruiting through Modeling of <I>Saccharomyces cerevisiae</I> based on Genomics for Industrial Application

    Shioya Suteaki, Shimizu Hiroshi, Hirasawa Takashi, Nagahisa Keisuke, Katakura Yoshio, Furusawa Chikara

    Asian Pacific Confederation of Chemical Engineering congress program and abstracts   2004   416 - 416   2004

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    In this report, present status of a project for a process development based on genomics going on in our groups is explained. Goals of the project supported by the New Energy and Industrial Technology Development Organization (NEDO) is to build object-oriented metabolic pathway models which describe metabolic flux change due to the cultivation conditions change such as from normal one to high osmotic pressure (sugar concentration), and also to apply the model for effectively designing an improved strain producing useful compounds which can play important roles for green chemistry. The model will be developed using the data of transcriptome, proteome and metabolites. In the project, the analysis system which was composed of bioreactor system for taking the on-line/off-line data of metabolic flux analysis, NMR analysis system and software system for data mining from transcriptome as well as proteome, has been set up and took data for high sodium chloride concentration as a model of high osmolarity condition. At the same time, three sub-projects have been proceeded; (1) Basic techniques for metabolic engineering in order to control the targeted pathway flux in <I>Saccharomyces cerevisiae</I> have been developed. (2) Profiling data of transcriptome and proteome have been taken at high sodium chloride concentrations. (3) As one of clustering techniques of the profiling data, SOM (self organizing map) has been extensively studied, applied to the transcriptome data obtained in this project. The project has been now on the stage of strain improvement based on the analysis of the genome information.

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  • Analysis of Adaptation of Yeast Cells to a High Osmotic Pressure Stress based on Proteomics

    Nagahisa Keisuke, Yamada Kazuyuki, Nakakura Yuki, Hirasawa Takashi, Katakura Yoshio, Shimizu Hiroshi, Shioya Suteaki

    Asian Pacific Confederation of Chemical Engineering congress program and abstracts   2004   431 - 431   2004

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    It is one serious problem that high sugar concentration at an initial phase and/or accumulation of product during cultivation causes osmotic stress to cells in fermentation process using yeast, <I>Saccharomyces cerevisiae</I>. In this study, we analyzed the protein expression of yeast using two-dimensional electrophoresis under a high osmotic pressure condition and investigated the physiological change in yeast cell. A laboratory strain FY834 and brewing one IFO2347 were grown in YPD medium. High osmotic pressure condition was prepared by adding NaCl at final concentration of 1 M in mid-log phase. Although the growth of FY834 was stopped and that of IFO2347 was decreased, the growth of both strains was recovered later. The period between addition of NaCl and recovery of growth was 4 hours for FY834 and 2 hours for IFO2347, respectively, indicating that IFO2347 was more tolerant to osmotic stress than FY834. Protein samples were extracted from cells before and after adding NaCl and applied to two-dimensional electrophoresis. Protein expression of FY834 compared to the sample before addition of NaCl was changed after 30 min from adding NaCl, while that of IFO2347 was changed after 15 min. These results suggest that IFO2347 responds more quickly to osmotic pressure than FY834. From the view point of the metabolic pathway, the expression of proteins related to glycerol synthesis were increased after addition of NaCl in both strains, suggesting that yeast strains adapt to high osmotic pressure by synthesis of glycerol. It was consistent to the results of metabolic flux analysis.

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  • Analysis of DNA Microarray Data using Self-Organizing Map and Hierarchical Clustering

    Yoshikawa Katsunori, Pandey Gaurav, Hirasawa Takashi, Katakura Yoshio, Nagahisa Keisuke, Furusawa Chikara, Shioya Suteaki, Shimizu Hiroshi

    Asian Pacific Confederation of Chemical Engineering congress program and abstracts   2004   778 - 778   2004

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    Genome-wide expression profiles in the yeast <I>Saccharomyces cerevisiae</I> responding to environmental stresses were analyzed using microarray. Two yeast strains, a laboratory strain (FY834) and a brewing one (IFO2347) which is more osmotic tolerant than FY834 strain were analyzed and the differences between the two strains in response to several environmental stresses were elucidated. Based on the analyses of DNA microarray data, the information for breeding osmosis tolerance strain was extracted. To analyze microarray data, a Self-Organizing map (SOM) was introduced to cluster gene expression data. The range of experimental errors was determined by multiple measurements of a same sample, and the effect of expected error on the clustering results of the SOM was simulated. The clusters obtained by the SOM were further clustered until the influence of experimental errors on the clustering results falls to a certain criterion. A hierarchical clustering was adopted to cluster the SOM results, and we could obtain the clustering results which cannot be further subdivided in consideration with the experimental errors. By introducing some other information such as sequences of transcription factors, gene ontology data and metabolic pathways, we found that in the obtained clusters the frequency distributions of some factors, such as genes having specific transcription factors and genes categorized to specific functions, are significantly deviate from those computed by randomized data. Moreover we identified some clusters which represent significant up-regulation or down-regulation only in the specific conditions. For example, a gene cluster in which gene expressions were up-regulated only in IFO2347 strain was identified, and which represents the difference in osmotic tolerance between these strains.

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  • A Kinetic Study of Direct Ethanol Production from Raw Starch by Various Arming Yeast Strains

    Khaw Teik-Seong, Katakura Yoshio, Koh Jun, Kondo Akihiko, Shioya Suteaki

    Asian Pacific Confederation of Chemical Engineering congress program and abstracts   2004   789 - 789   2004

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    Single step bioconversion of raw starch to ethanol has raised considerable interest in recent years. We have developed yeast strains displaying α-amylase and glucoamylase on yeast cell surface for this purpose. The advantage of this system is that the displayed enzymes can be recovered easily with the yeast after fermentation compared to the case that these amylolytic enzymes are secreted into medium. However, display of α-amylase on cell surface may reduce the apparent association rate of the enzyme to the substrate because both of them are huge molecules, resulting a lower apparent conversion rate. The recovery of the yeast cells together with the amylolytic enzymes becomes easier when a flocculating yeast strain is used as the host strain. However, flocculation of the arming yeast may again reduce the apparent conversion rate. To establish an industrial ethanol production process with a good cost performance ratio, the advantages and disadvantages of each strategy should be evaluated quantitatively. Therefore, from a viewpoint of kinetics, we compared the performance of the fermentation systems in the case that α-amylase is displayed on the cell surface or secreted in the medium, and in the cases that a flocculating or non-flocculating strain is used as the host strain. A kinetic model has been developed to simulate the direct ethanol fermentation from raw corn starch by arming yeast. The simulation results were found agree well with experimental data obtained from direct ethanol fermentation.

    DOI: 10.11491/apcche.2004.0.789.0

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  • Changes in microflora duding composting of an aquatic plant, Brazilian elodea Reviewed

    T Nishida, T Fujimura, T Omasa, Y Katakura, K Suga, S Shioya

    JOURNAL OF CHEMICAL ENGINEERING OF JAPAN   36 ( 10 )   1201 - 1205   2003.10

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    We investigated the composting process of an aquatic plant for developing an effective method of their recycling. The changes in microflora were monitored by temperature gradient gel electrophoresis (TGGE) of the DNA fragments amplified by reverse transcription PCR from the 16S ribosomal RNA extracted from the compost. The decrease in the cellulose content of aquatic plant compost was found to be faster than that of other composts. During the phase when the specific activity of cellulase was high, the decrease in the cellulose content was rapid. In the TGGE analysis, a few bands were found that changed in intensity in relation to that of the specific activity of cellulase. The bacteria responsible for the bands were isolated and, based on the DNA sequences of the 16S rRNA, identified as Bacillus spp. For an effective composting process, we examined the use of the composted material as a seed. When the resultant compost was used as a seed for the next cycle of composting, the decrease in cellulose content during the second composting cycle occurred faster than that during the first cycle.

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  • 水生植物のコンポスト化におけるセルロースの分解

    片倉 啓雄, 平松 真一郎, 西田 武央, 塩谷 捨明

    化学工学会 研究発表講演要旨集   2003   141 - 141   2003

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    Language:Japanese   Publisher:公益社団法人 化学工学会  

    DOI: 10.11491/scej.2003f.0.141.0

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  • Construction of a fuzzy control system for a bioreactor using biomass support particles Reviewed

    M Kishimoto, M Beluso, T Omasa, Y Katakura, H Fukuda, K Suga

    JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC   17 ( 3-5 )   207 - 213   2002.6

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    A fuzzy control system was applied to a bioreactor in which the flocculent yeast Saccharomyces diastaticus ATCC 60715 was immobilized by entrapment in a reticulated polyurethane foam cube (6 nun x 6 mm x 6 mm, biomass support particle (BSP)). The fuzzy inference algorithm was used to calculate the suitable level of glucose feed rate from the monitored data of the CO2 evolution rate (CER) and the integrated amount of CO2 evolution. One of the main concerns is the mass transfer of glucose in the BSP in which S. diastaticus was immobilized. With the BSPs, glucose diffusivity becomes lower and starvation of the cells can occur if the control system is not quick enough to respond to the starvation. The fuzzy control system was successful in controlling the glucose feed pump to maintain a suitable glucose concentration for the smooth continuation of ethanol production. (C) 2002 Elsevier Science B.V. All rights reserved.

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  • Analysis and optimization of biopanning process of phage display libraries

    Y Katakura, GQ Zhuang, S Uchida, T Furuta, T Omasa, M Kishimoto, K Suga

    BIOLOGICAL SYSTEMS ENGINEERING   830   271 - 284   2002

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    A kinetic model describing the affinity selection process of phage display libraries was established and verified experimentally using ribonuclease A (RNase A) and anti-RNase A single chain Fv phage antibody. Desorption of target molecules from a solid phase and orientation of the epitopes of adsorbed target molecules are taken into account in this model. The ratio of the effective antigen to the total antigen was estimated to be 0.0127(+/-)0.0018 when RNase A was immobilized on polystyrene beads by passive adsorption. The model can faithfully describe the recovery of the phage antibody in a round of biopanning based on the following parameters; the effective concentration of RNase A on the beads, the desorption rate constant of RNase A from the beads, the dissociation constant and dissociation rate constant of the phage antibody from RNase A, and the time for blocking, binding and washing in the biopanning process. The causes of the typical problems in biopanning are explained quantitatively by the model and the practical solutions for the problems are discussed.

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  • Design of affinity selections of ligands from phage display libraries based on kinetic studies Reviewed

    Y Katakura, S Uchida, T Furuta, K Suga, S Shioya

    6TH WORLD MULTICONFERENCE ON SYSTEMICS, CYBERNETICS AND INFORMATICS, VOL VI, PROCEEDINGS   425 - 430   2002

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    The affinity of a ligand to its target has often been evaluated by its dissociation constant (K-D). However, K-D is a static parameter that assumes the equilibrium of a ligand reaction with a target. Since, in practical ligand applications, the reaction time is usually limited, the properties of ligands must be evaluated dynamically. A phage display system is one of the most powerful tools for isolating specific ligands such as antibodies. We established kinetic models that describe antibody-antigen reactions that incorporate the behaviors of phage antibodies into a process that isolates them from phage display libraries. Based on this model, we rationally designed experimental conditions for isolating antibodies with a high association rate constant (k(on)), thus enabling the rapid assay of their antigens. From a customized phage antibody library in which two hypervariable regions of an original antibody are randomized, some antibodies with higher k(on) values than the original antibody were successively isolated under the rationally designed conditions.

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  • Expression and amplification of glutamine synthetase gene for constructing ammonia-metabolizing cell lines in hybrid bioartificial liver support system Reviewed

    T Omasa, K Kim, S Hiramatsu, Y Katakura, N Kishimoto, T Matsumura, S Enosawa, S Suzuki, H Amemiya, K Suga

    ANIMAL CELL TECHNOLOGY : BASIC & APPLIED ASPECTS, VOL 12   263 - 267   2002

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  • Measurement of association rate constant of antibody-antigen interaction in solution based on enzyme-linked immunosorbent assay Reviewed

    GQ Zhuang, Y Katakura, T Omasa, M Kishimoto, KI Suga

    JOURNAL OF BIOSCIENCE AND BIOENGINEERING   92 ( 4 )   330 - 336   2001.10

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    A simple and rapid method based on enzyme-linked immunosorbent assay (ELISA) was developed for measuring the association rate constant of antibody-antigen interactions. An antibody and its antigen are mixed in a solution to initiate the equilibrium reaction. At different time intervals, the amount of the free antibody in the reaction mixture is estimated by an indirect ELISA. The association rate constant was estimated by nonlinear regression against an equation introduced from the derivation of the mass balance of antigen-antibody interaction. This method can determine the association rate constant of antibodies with a dissociation rate constant up to 5 x 10(-3) s(-1). The association rate constant of a single-chain Fv (scFv) to its antigen, bovine pancreatic ribonuclease A (RNase A), determined by the present method agreed well with those determined by the fluorescence polarization method and surface plasmon resonance method. No significant difference in the association rate constant was found between the soluble anti-RNase A scFv and the same scFv displayed on a phage (5.65+/-0.54x10(4) M-1 s(-1) and 5.96+/-0.56x10(4) M-1 s(-1), respectively).

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  • Flow cytometry: An improved method for the selection of highly productive gene-amplified CHO cells using flow cytometry Reviewed

    T Yoshikawa, F Nakanishi, Y Ogura, D Oi, T Omasa, Y Katakura, M Kishimoto, K Suga

    BIOTECHNOLOGY AND BIOENGINEERING   74 ( 5 )   435 - 442   2001.9

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    In previous work, we clarified the relationship between the productivity and stability of gene-amplified cells and the location of the amplified gene. The location of the amplified gene enabled us to classify resistant cells into two types. One type of resistant cell group, in which the amplified genes were observed near the telomeric region, was named the "telomere type." The other type of cell group, in which the amplified genes were observed in other chromosomal regions, was named the "other type." The phenotypes of these two types of cells are very different. In this experiment, using a fluorescein isothiocyanate-labeled methotrexate (F-MTX) reagent with flow cytometry, we were easily able to distinguish between highly productive cells and the other types of cells. The level of fluorescence differed according to the difference in resistance to MTX. Based on this new finding, highly productive gene-amplified cells could be isolated from heterogeneous gene-amplified cell pools more easily than by the method of limiting-dilution assay. The limiting-dilution method requires several months to obtain highly productive gene-amplified cells, while our flow-cytometry-based method of selection requires only a few weeks. (C) 2001 John Wiley & Sons, Inc.

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  • A kinetic model for a biopanning process considering antigen desorption and effective antigen concentration on a solid phase Reviewed

    GQ Zhuang, Y Katakura, T Furuta, T Omasa, M Kishimoto, K Suga

    JOURNAL OF BIOSCIENCE AND BIOENGINEERING   91 ( 5 )   474 - 481   2001.5

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    A phage display library is a powerful tool for screening ligands such as antibodies and peptides that specifically recognize a target. In this study, we established a kinetic model describing the affinity selection process of phage display libraries and verified the model experimentally. Desorption of target molecules from a solid phase and orientation of the epitopes of adsorbed target molecules are taken into account in this model. The ratio of the effective antigen density to the total antigen density was estimated to be 0.0127(+/-)0.0018 when bovine pancreatic ribonuclease A (RNase A) adsorbed on polystyrene beads was recognized by an anti-RNase A single-chain Fv phage antibody. The model can faithfully describe the recovery of the phage antibody in a round of biopanning based on the effective concentration of RNase A on the beads, the desorption rate constant of RNase A from the beads, the dissociation constant and dissociation rate constant of the phage antibody from RNase A, and the time for blocking, equilibrium and washing in the biopanning process. A recommended biopanning protocol based on the model is also described.

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  • Constrained optimization of L-lysine production based on metabolic flux using a mathematical programming method Reviewed

    K Tada, M Kishimoto, T Omasa, Y Katakura, KI Suga

    JOURNAL OF BIOSCIENCE AND BIOENGINEERING   91 ( 4 )   344 - 351   2001.4

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    Constrained optimization for microbial fermentation was studied. For optimization, we used not the maximum principle but a nonlinear programming method because of the need to consider many metabolic reactions. In the case of L-lysine fermentation, the optimization problem in L-lysine production was formulated as a nonlinear programming problem. In general, the state equations based on material balances are represented as differential equations, but such equations which are dependent on time can not be applied to a nonlinear programming problem. Therefore, the state equations were made discrete in a time base, and a new single vector which is not dependent on time was substituted. From these formulae, the objective function and the constraints using nonlinear programming problem were defined as the amount of L-lysine produced, and as a metabolic reaction model and empirical equations, respectively. Computer program was developed to solve this constrained nonlinear programming problem. The applied algorithm of the computer programming was a sequential quadratic programming method (SQP method). When the constrained nonlinear programming problem is solved using the SQP method, the maximum amount of L-lysine produced and the optimal feeding rate of L-threonine could be calculated. From the calculated results, it was clear that introduction of the equality and inequality constraints was easy. L-Lysine at a concentration up to 75.3 g/l could be produced when the fermentation was carried out under optimal conditions.

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  • Construction and evaluation for the liver fuctional HepG2 cell line in hybrid bioartificial liver support system. Reviewed

    T. Omasa, K. Kim, S. Hiramatsu, Y. Katakura, M. Kishimoto, S. Enosawa, K. Suga

    Artificial Organs   25, 819   819 - 819   2001

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  • In vitro selection of hematoporphyrin binding DNA aptamers Reviewed

    A Okazawa, H Maeda, E Fukusaki, Y Katakura, A Kobayashi

    BIOORGANIC & MEDICINAL CHEMISTRY LETTERS   10 ( 23 )   2653 - 2656   2000.12

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:PERGAMON-ELSEVIER SCIENCE LTD  

    DNA aptamers that bind to hematoporphyrin IX (HPIX) were isolated using an in vitro selection technique. Most aptamers obtained after the 7th and 10th rounds contained guanine-rich sequences. Binding assay using fluorescence polarization technique and structural analysis by CD spectra revealed that the parallel guanine-quartet structure of the aptamer participates in the recognition of HPIX. (C) 2000 Elsevier Science Ltd. All rights reserved.

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  • L-lysine production by exponential feeding of L-threonine Reviewed

    K Tada, M Kishimoto, T Omasa, Y Katakura, KI Suga

    JOURNAL OF BIOSCIENCE AND BIOENGINEERING   90 ( 6 )   669 - 674   2000.12

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    The effect of L-threonine feeding in the production phase on L-lysine production by Brevibacterium flavum, which requires L-homoserine or L-threonine for cell growth, was investigated considering the concerted inhibition by L-threonine plus L-lysine, and the metabolism related to lysine production. Exponential feeding of L-threonine increased L-lysine production to 70 g/l about three times that without feeding. From the analysis of the metabolic flux, carbon flux of L-lysine synthesis pathway in the production phase after L-threonine feeding was higher than that in the growth phase. The results show that feeding of an inhibitory substance may increase the production, especially when the substance is necessary for the continuation of cell growth and/or production.

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  • Control of antibody-antigen interaction using anion-induced conformational change in antigen peptide Reviewed

    Y Katakura, T Miyazaki, H Wada, T Omasa, M Kishimoto, Y Goto, K Suga

    PROTEIN ENGINEERING   13 ( 10 )   719 - 724   2000.10

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:OXFORD UNIV PRESS  

    The binding of a monoclonal antibody to an epitope peptide was controlled by the conformational change of the epitope peptide induced by anions, We synthesized peptides in which the epitope sequence DTYRYI for the monoclonal antibody AU1 is located between amphiphilic peptides (KKLL)(n) and (LLKK)(n). In the absence of an appropriate anion, the peptide was in a random coil state and the epitope was linear. In contrast, in the presence of an appropriate anion, the peptide exhibited an anti-parallel a-helical structure and the epitope was subsequently 'bent', In the presence of 41 muM triphosphate, the association constant between the antibody and the peptide was decreased by one order of magnitude in the case of n = 3 and at least three orders of magnitude in the case of n = 4 or 5, Oligo-DNAs, as anions, dissociated the antibody-peptide complex, whereas triphosphate did not. The DNA concentrations required for 50% dissociation of the antibody-peptide complex at pH 7.5 were 4x10(-8), 1x10(-7) and 6x10(-6) M for decamer, octamer and hexamer DNA, respectively.

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  • Amplified gene location in chromosomal DNA affected recombinant protein production and stability of amplified genes Reviewed

    Y Yoshikawa, F Nakanishi, Y Ogura, D Oi, T Omasa, Y Katakura, M Kishimoto, K Suga

    BIOTECHNOLOGY PROGRESS   16 ( 5 )   710 - 715   2000.9

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:WILEY-BLACKWELL  

    Previously, we established an easy and quick construction method for obtaining a stable and highly productive gene-amplified recombinant Chinese hamster ovary (CHO) cell line. With a gradual increase in methotrexate (MTX) concentration, gene-amplified cell pools had high and stable specific growth and production rates. Moreover, the phenotype of gene-amplified cells seemed to be affected by the location of the amplified gene in chromosomal DNA. We suspected that various kinds of gene-amplified cells might appear during the long-term selection to construct gene-amplified cell pools. To clarify the behavior of gene-amplified cell pools during a stepwise increase of MTX concentration, me isolated gene-amplified clones derived from gene-amplified cell pools. We compared the characteristics of isolated clones, such as the productivity of recombinant protein, stability of amplified genes, and the location of amplified genes. As a result, telomere-type clones, in which the amplified gene was located near the telomeric region, were found to be more stable and productive than other types of clones. Telomere-type clones had over 100 copies of amplified genes in the chromosomal DNA. In contrast, a large number of other types of clones had less than 10 copies of amplified genes. During long-term cultivation in the absence of MTX, in other types of clones, amplified genes rapidly decreased in the chromosomal DNA.

    DOI: 10.1021/bp000114e

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  • Evaluation of stable and highly productive gene amplified CHO cell line based on the location of amplified genes Reviewed

    T Yoshikawa, F Nakanishi, S Itami, D Kameoka, T Omasa, Y Katakura, M Kishimoto, K Suga

    CYTOTECHNOLOGY   33 ( 1-3 )   37 - 46   2000.7

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:KLUWER ACADEMIC PUBL  

    In order to establish an easy and quick construction method for obtaining a stable and highly productive gene-amplified recombinant Chinese Hamster Ovary (CHO) cell line, various kinds of stepwise methotrexate (MTX) selection were carried out. The specific growth and production rates of the cell were compared with each other, and the distribution of the amplified gene location was determined using fluorescence in situ hybridization (FISH). The specific growth and production rates of the cell pool reached the highest levels under the selection condition in which the stepwise increase in the MTX concentration was most gradual; about 82% of amplified genes were observed near the telomeric region. During long-term cultivation without MTX, the percentage of amplified genes near the telomeric region hardly changed, but that of amplified genes at other regions decreased. Based on these results, stable and highly productive cell pools could be easily and quickly constructed and amplified and gradual stepwise increase of the MTX concentration. In addition, the FISH technique was powerful tool to evaluate highly productive and stable gene-amplified cells based on the chromosomal location of the amplified gene.

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  • Efficient production of desulfurizing cells with the aid of expert system Reviewed

    M Kishimoto, M Inui, T Omasa, Y Katakura, K Suga, K Okumura

    BIOCHEMICAL ENGINEERING JOURNAL   5 ( 2 )   143 - 147   2000.6

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:ELSEVIER SCIENCE SA  

    An expert system was used to achieve the high production of desulfurizing cells of Rhodococcus erythropolis KA 2-5-1. By adding a proper amount of sulfur containing component with the aid of the expert system, we could avoid excess feeding which resulted in the lowering of desulfurizing activity and starvation which caused serious damage to cell growth. In order to determine the addition amount by the expert system, the data of the amount of chemical elements contained in the cells were used as a reference for comparison with the medium components present. Culture experiments were carried out using a 51 jar fermenter with several kinds of media whose components were determined based on the inferred results with the aid of the expert system. We could restrict the amount of the sulfur component addition so that sulfur was a growth-limiting factor; in contrast, the amounts of other elements were sufficient for growth.
    As a result, the maximum specific production rate of 2-hydroxy biphenyl (2HBP) and the maximum cell concentration were 20 mmol kg-drycells(-1) h(-1) and of 45 g-drycells l(-1), respectively. At 100 h of cultivation, 1 g/l of dibenzothiophene (DBT) was converted to 2HBP within 20 h, i.e., 10 mmol kg-drycells(-1) h(-1) of specific desulfurization activity, and the specific activity remained stable for a long period in the culture experiment. (C) 2000 Elsevier Science S.A. All rights reserved.

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  • On-line control of feeding of medium components to attain high cell density Reviewed

    H Suzuki, M Kishimoto, Y Kamoshita, T Omasa, Y Katakura, K Suga

    BIOPROCESS ENGINEERING   22 ( 5 )   433 - 440   2000.5

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    On line control coupled with an expert system was constructed for the control of a fed-batch culture with the aim of achieving a high fell density. During the cultivation, the expert system could monitor the extents of sufficiencies in the amounts of chemical elements in the medium every 10 min, and suggest a modification to the feeding control policy if the amount of a particular component was inadequate for cell growth. However, we often encounter such a kind of cultivations in which some particular carbon source such as glucose and ethanol should be controlled at low concentration in many culture processes, because the excess feeding might cause the growth inhibition by its own accumulation in the culture broth, or the biproduct accumulation like as lactate or acetate, unsuitable substances for smoothed growth. In this study, we developed an online control system based on production rules which managed the glucose feed rate from DO signal. The online control was carried our by the control computer connected with the other computer for expert system, because a relatively long time (several minutes) was needed for the inference of the expert system and the influence of the starvation of carbon source on the cell growth is not negligible even in several minutes. The on-line control system with expert system was applied to the production of cell mass of E, coli W3110 and the final cell concentration reached 137 g-dry cell weight/l.

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  • Increase in desulfurization activity of Rhodococcus erythropolis KA2-5-1 using ethanol feeding Reviewed

    H Yan, M Kishimoto, T Omasa, Y Katakura, K Suga, K Okumura, O Yoshikawa

    JOURNAL OF BIOSCIENCE AND BIOENGINEERING   89 ( 4 )   361 - 366   2000.4

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    Rhodococcus erythropolis KA2-5-1 is one of the best strains for the desulfurization of dibenzothiophene (DBT) via a sulfur-specific pathway in which DBT is converted to the end product, 2-hydroxybiphenyl, by releasing sulfite via DBT-sulfone and 2-(2'-hydroxyphenyl) benzene sulphinate. The objective of this research is to develop a culture method in order to attain a high cell density with a high level of specific desulfurization activity. Compared with glucose or glycerol, ethanol was found to be a preferable carbon source for obtaining a high specific activity (SA) of desulfurization. When the amount of DBT fed was restricted by feeding 2.9 mg-DBT/g-ethanol solution, the maximum SA and final cell concentration were 135.5 (mmol-2HBP/kg-dry cell weight.h) and 37 (g-dry cell weight/l), respectively. On the other hand, when glucose or glycerol was used as a carbon source, the SA was lower than 50 (mM-2HBP/kg-dry cell weight.h) and the final cell concentration was also lower than 27 (g-dry cell weight/l). The activities of the desulfurization enzymes in R. erythropolis KA2-5-1 grown on ethanol were remarkably higher than when the strain was grown on glucose or glycerol. It was also suggested that NADH, which is produced by the biochemical reaction of NAD with ethanol catalyzed by alcohol dehydrogenase, might contribute to the conversion of FMN to FMNH2, which is a coenzyme for the activities of desulfurization enzymes.

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  • Effect of extra N-terminal residues on the stability and folding of human lysozyme expressed in Pichia pastoris Reviewed

    S Goda, K Takano, Y Yamagata, Y Katakura, G Yutani

    PROTEIN ENGINEERING   13 ( 4 )   299 - 307   2000.4

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    A human lysozyme expression system by Pichia pastoris was constructed with the expression vector of pPIC9, which contains the a-factor signal peptide known for high secretion efficiency. P.pastoris expressed the human lysozyme at about 300 mg/I broth, but four extra residues (Glu(-4)-Ala(-3)-Glu(-2)-Ala(-1)-) were added at the N-terminus of the expressed protein (EAEA-lysozyme), To determine the effect of the four extra residues on the stability, structures and folding of the protein, calorimetry, X-ray crystal analysis and GuHCl denaturation experiments were performed. The calorimetric studies showed that the EAEA-lysozyme was destabilized by 9.6 kJ/mol at pH 2.7 compared with the wild-type protein, mainly caused by the substantial decrease in the enthalpy change (Delta H). On the basis of structural information on the EAEA-lysozyme, thermodynamic analyses show that (1) the addition of the four residues slightly affected the conformation in other parts far from the N-terminus, (2) the large decrease in the enthalpy change due to the conformational changes would be almost compensated by the decrease in the entropy change and (3) the decrease in the Gibbs energy change between the EAEA and wild-type human lysozymes could be explained by the summation of each Gibbs energy change contributing to the stabilizing factors concerning the extra residues.

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  • Energy metabolism and antibody production based on flux analysis in hybridoma Reviewed

    T Omasa, T Iemura, K Furuichi, Y Katakura, M Kishimoto, K Suga

    ANIMAL CELL TECHNOLOGY: CHALLENGES FOR THE 21ST CENTURY   11 - 15   1999

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    The specific antibody production rate is closely related to the specific ATP production rate. In order to increase the specific antibody production rate by increasing the specific ATP production rate, the effects of oxygen concentration reinforcement (4.7, 6.9 and 10.3 mgl(-1)) or metabolic intermediate addition (pyruvate, malate and citrate) on ATP production were investigated under glutamine-limited continuous cultivation with a constant specific growth rate. As a result, the specific ATP production rate decreased under high oxygen concentration cultivation. However, the metabolic fluxes related to ATP production were increased and higher specific ATP and antibody production rates were achieved by addition of metabolic intermediates.

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  • Effect of sugar composition on the heterogeneity of antibody in hybridoma cultivation Reviewed

    T Omasa, Y Kitamoto, J Tanaka, Y Katakura, M Kishimoto, K Suga

    ANIMAL CELL TECHNOLOGY: CHALLENGES FOR THE 21ST CENTURY   139 - 143   1999

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    In order to investigate the effect of the sugar composition of the medium on IgG glycosylation in mouse hybridoma cultivation, the batch culture of mouse hybridoma 3A21 (RCB 1285) was carried out under various sugar compositions. The macroheterogeneity (relative ratio of glycosylated antibody) was analyzed by an enzyme-linked lectin binding assay during cultivation. The relative ratio of glycosylated antibody decreased as cultivation progressed. However, in mannose-enriched cultivation, the relative ratio was maintained at a high level. The microheterogeneity of each oligosaccharide chain was analyzed by two-dimensional mapping techniques. The high-mannose type oligosaccharide chain content was high in mannose-enriched cultivation. The content of oligosaccharide chains terminating in galactose residues, which plays an important role in the immune system, was shown to be high in galactose-enriched cultivation. Using galactose- and mannose-enriched cultivations, the number of oligosaccharide chains terminating in galactose residues could be increased.

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  • Evaluation of stability in the DHFR gene amplification system using fluorescence in situ hybridization Reviewed

    F Nakanishi, T Yoshikawa, S Itami, T Omasa, Y Katakura, M Kishimoto, K Suga

    ANIMAL CELL TECHNOLOGY: BASIC & APPLIED ASPECTS, VOL 10   259 - 263   1999

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    Tn order to obtain a stable and highly productive gene-amplified recombinant Chinese Hamster Ovary (CHO) cell line, five binds of stepwise methotrexate (MTX) selection were carried out. The specific growth and production rates of the cells were compared with each other, and the distribution of the location of amplified genes was determined using fluorescence in situ hybridization (FISH). The specific growth and production rates of the cell line obtained under the selection condition in which the stepwise increase in the MTX concentration was most gradual reached the highest levels and under this condition about 80% of the amplified genes were observed near the telomeric site. During long-term cultivation without MTX, the percentage of amplified genes near the telomeric site hardly changed, but that of amplified genes at other sites decreased. The specific production rate gradually decreased during cultivation without MTX To clarify the relationship between the specific production rate and the location of amplified genes, a cloned cell line, DR1000L4N, was obtained. This cell line showed higher productivity, and the amplified genes were all situated near the telomeric site.

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  • Construction of ammonia metabolizing cell line for artificial hybrid liver support system using recombinant DNA techniques Reviewed

    T Omasa, S Urayama, M Yamanaka, N Tanimura, Y Katakura, M Kishimoto, K Suga, S Enosawa, H Amemiya

    KAGAKU KOGAKU RONBUNSHU   24 ( 2 )   184 - 189   1998.3

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    In order to establish a cell line suitable for a hybrid artificial liver support system, an ammonia metabolizing activity is given to a Chinese Hamster Ovary (CHO) cell line using genetic engineering techniques. CHO-K1 cells were transformed with pSV 2-GS vector which contain glutamine synthetase gene connected with SV 40 promoter. The recombinant cell line was selected under various concentrations of glutamine synthetase inhibitor, methionine sulfoximine (MSX). The 800 mu M MSX tolerable cell line has high glutamine synthetase activity and can remove ammonium from the medium. The kinetic parameters of this cell line were investigated under 0, 1, or 2 mM ammonia concentration. Ammonia consumption occurred during the middle phase of cultivation (growth phase). The specific ammonium consumption rate of the established cell line during growth phase is about one fifth of that of primary hepatocyte.

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  • Effect of methanol concentration on the production of human beta(2)-glycoprotein I domain V by a recombinant Pichia pastoris: A simple system for the control of methanol concentration using a semiconductor Gas Sensor Reviewed

    Y Katakura, WH Zhang, GQ Zhuang, T Omasa, M Kishimoto, W Goto, KI Suga

    JOURNAL OF FERMENTATION AND BIOENGINEERING   86 ( 5 )   482 - 487   1998

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    The methylotrophic yeast Pichia pastoris is one of the best hosts for the production of foreign proteins because of the presence of the strong AOX1 promoter induced by methanol. Methanol feeding during the production phase of the foreign proteins is important because methanol not only induces protein production but also provides energy source for the host cells. Excess methanol inhibits the growth of host cells, while an insufficient amount of energy source and/or methanol starvation lead to poor growth and production. We constructed a simple methanol control system consisting of a semiconductor gas sensor and a relay. Using this system, we studied the effect of methanol concentration on the production of a model foreign protein, human beta(2)-glycoprotein I domain V. The methanol concentrations were kept constant at 1.5, 10, 17, or 31 g.l(-1) (+/-5%) during the production phase. Although the specific rates of growth and methanol consumption decreased with increase in the methanol concentration, the specific production rates increased, indicating that the energy for the production competed with that for cell growth. Accordingly, we provided glycerol as an extra energy source during the production phase, with the result that the specific production rate increased two times. Our simple and inexpensive system will help bioengineering studies on the production of recombinant proteins in P. pastoris, the growth and production of objective proteins in which are dependent on the methanol concentration.

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  • The importance of ionic strength as a parameter in screening peptide ligands from a phage display library Reviewed

    Y Katakura, ET Lim, S Tsujii, T Omasa, K Suga

    JOURNAL OF FERMENTATION AND BIOENGINEERING   85 ( 4 )   447 - 450   1998

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    Peptide ligands which bound to a model monomeric protein, bovine pancreatic ribonuclease A, could be isolated from a constrained random hexapeptide phage library. Selection was successful in a low ionic strength buffer (10 mM sodium phosphate, pH 6.0), whereas it failed in TBS (50 mM Tris-Cl, 150 mM NaCl, pH 7.5). Two of the displayed amino acid sequences from among the clones isolated were AEGACEQLDYNC and AEGACLWHDQLC. Electrostatic interaction appeared to play an important role in the binding because these phages could not bind to RNase A at a high ionic strength. The results suggest that selection in low ionic strength buffers could make possible the isolation of peptide ligands against proteins of interest which do not originally interact with another peptide or protein.

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  • Reduction of lake water eutrophication caused by nitrogen and phosphorous from paddy nearby field using a circular irrigation system Reviewed

    K Suga, N Fukui, M Tatani, Y Katakura, T Omasa, M Kishimoto

    COMPUTER APPLICATIONS IN BIOTECHNOLOGY 1998   553 - 559   1998

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    Language:English   Publishing type:Research paper (international conference proceedings)   Publisher:PERGAMON PRESS LTD  

    An investigation was made into the water quality and hydrology in paddy fields adjacent to Lake Yogo, Japan, where a circular irrigation system with an oxidation ditch for removal of nitrogen, phosphorus, and COD was established in 1997 with the aim of saving irrigation water and reducing pollutants in drainage water. A simulation was made, and evaluated by comparing the simulated values for nitrogen and phosphorus in the drainage water from the agricultural land with observed data. It was concluded from the evaluation that the simulation could predict a reduction in the nutrient load entering the lake. The circular irrigation system could contribute to a reduction of the pollutant load by 44.2% for total phosphorus and 26.9% of for total nitrogen compared with the conventional irrigation system by operating the circulation pumps for 7 hours a day during the irrigation period. Copyright (C) 1998 IFAC.

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  • Selection and stability for a recombinant CHO cell line expressing human GM-CSF in gene amplification Reviewed

    T Omasa, S Itami, D Kameoka, Y Katakura, K Suga

    ANIMAL CELL TECHNOLOGY: BASIC & APPLIED ASPECTS, VOL 9   29 - 33   1998

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    Language:English   Publishing type:Research paper (international conference proceedings)   Publisher:SPRINGER  

    We investigated the relationship between the specific production rate and the concentration of the toxic drug methotrexate (MTX), inhibitory to nucleic acid synthesis in the medium, during the construction of recombinant CHO cells. The results of selection of MTX tolerant cells when the MTX concentration was increased under 10 different stepwise conditions showed that the number of days required to obtain cells resistant to 1000 nM MTX depended on the selection conditions. Tolerant cells were obtained most rapidly at an MTX concentration of 10nM. With increasing MTX concentration, the specific production rate increased, while the specific growth rate gradually decreased. In the case of a gradual increase in the MTX concentration, the specific production rate reached a higher level. We also investigated the stability of the specific production rate during cultivation over a long period with or without MTX. In long-term cultivation, the specific production rate decreased, while the specific growth rate remained at the same level. The specific production rate in a culture without MTX decreased more rapidly than that in a culture with MTX.

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  • Effect of culture conditions on glycosylation in hybridoma antibody production Reviewed

    T Omasa, J Tanaka, K Amimoto, Y Katakura, K Suga

    ANIMAL CELL TECHNOLOGY: BASIC & APPLIED ASPECTS, VOL 9   35 - 39   1998

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    To investigate the effect of culture conditions on glycosylation patterns, we carried out the batch cultivation (using serum-containing or serum-free media) and glucose-limited continuous cultivation (serum-free medium). Con A lectin blotting showed that N-linked glycosylation occurred under all the culture conditions used. The sugar composition of the oligosaccharide chain in each culture was studied using gas-chromatography and was found to be different under each culture condition. The detailed structure of each oligosaccharide chain was then analyzed by two-dimensional mapping techniques using pyridylamination method. The oligosaccharide chain content in human IgG was higher in batch cultivation using a serum medium than that in serum-free cultures. However, oligosaccharide chain content with a galactose residue at the chain end, which plays an important role in the immune system, was shown to be high in glucose-limited continuous cultivation under a low specific growth rate.

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  • Energy metabolism and antibody production based on flux analysis in hybridoma cultivation Reviewed

    T Omasa, K Furuichi, T Iemura, Y Katakura, M Kishimoto, K Suga

    COMPUTER APPLICATIONS IN BIOTECHNOLOGY 1998   451 - 454   1998

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    Language:English   Publishing type:Research paper (international conference proceedings)   Publisher:PERGAMON PRESS LTD  

    Glucose or glutamine-limited continuous cultivation of hybridoma cells was carried out. Under steady-state conditions, the specific consumption and production rates were calculated at various specific growth rates. On the basis of these results, the fluxes of the metabolic pathway were calculated. It was found that increasing the specific growth rate caused the specific ATP and antibody production rates to decrease. An estimation of the ATP consumption rates for cell growth and antibody production showed that the proportion of ATP consumed in antibody production decreased at a high specific growth rate. In order to increase the ATP production while keeping the specific growth rate high, the reduced metabolic fluxes were increased by the addition of pyruvate. As a result, higher specific ATP and antibody production rates were achieved at a high specific growth rate. Copyright (C) 1998 IFAC.

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  • 遺伝子組換えによるハイブリッド型人工肝に適したアンモニア除去細胞の構築. Reviewed

    大政健史, 浦山重雄, 山中貢, 谷村奈緒子, 片倉啓雄, 岸本通雅, 菅健一, 絵野澤伸, 雨宮浩

    化学工学論文集   24(2), 184-189   1998

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  • Fluorescence polarization study of a salt bridge between a single chain Fv and its antigen ribonuclease A Reviewed

    Y Katakura, T Kumamoto, Y Iwai, Y Kurokawa, T Omasa, KI Suga

    MOLECULAR IMMUNOLOGY   34 ( 12-13 )   887 - 890   1997.8

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    The interaction between a single chain Fv (sFv) of the monoclonal antibody 3A21 and its antigen, bovine pancreatic ribonuclease A (RNase A), was studied by site-directed mutagenesis of the hypervariable regions and fluorescence polarization analysis. The affinity constants of wild-type sFv and a mutant sFv D31A (Asp(31) of heavy chain was replaced by Ala) for RNase A were found to be 2.7 x 10(7) and 4.7 x 10(6)M(-1) in PBS at pH 7.2 and 37 degrees C, respectively. Whereas the affinity constant of D31A is not affected by NaCl concentration, that of wild-type sFv is almost the same as that of D31A in the presence of more than 1 M NaCl. These results demonstrate that Asp(31) of the heavy chain interacts electrostatically with a positively charged amino acid residue of RNase A. (C) 1998 Elsevier Science Ltd. All rights reserved.

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  • Fluorescence polarization study of a salt bridge between a single-chain Fv and its antigen ribonuclease A Reviewed

    Y Katakura, T Kumamoto, Y Iwai, Y Kurokawa, T Omasa, K Suga

    MOLECULAR IMMUNOLOGY   34 ( 10 )   731 - 734   1997.7

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:PERGAMON-ELSEVIER SCIENCE LTD  

    The interaction between a single-chain Fv (sFv) of the monoclonal antibody 3A21 and its antigen, bovine pancreatic ribonuclease A (RNase A), was studied by site-directed mutagenesis of the hypervariable regions and fluorescence polarization analysis. The affinity constants of wild-type sFv and a mutant sFv D31A (Asp(31) of heavy chain was replaced by Ala) for RNase A were found to be 2.7 x 10(7) and 4.7 x 10(6) M-1 in PBS at pH 7.2 and 37 degrees C, respectively. While the affinity constant of D31A is not affected by NaCl concentration, that of wild-type sFv is almost the same as that of D31A in the presence of more than 1 M NaCl. These results demonstrate that Asp(31) of the heavy chain interacts electrostatically with a positively charged amino acid residue of RNase A. (C) 1997 Published by Elsevier Science Ltd. All rights reserved.

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  • Structure and function of the recombinant fifth domain of human beta(2)-glycoprotein I: Effects of specific cleavage between Lys77 and Thr78 Reviewed

    Y Hagihara, K Enjyoji, T Omasa, Y Katakura, K Suga, M Igarashi, E Matsuura, H Kato, T Yoshimura, Y Goto

    JOURNAL OF BIOCHEMISTRY   121 ( 1 )   128 - 137   1997.1

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:JAPANESE BIOCHEMICAL SOC  

    In order to elucidate the mechanism of binding of beta(2)-glycoprotein I (beta(2)-GPI) to cardiolipin (CL), we constructed a high-level expression system for the C-terminal domain (Domain V) of beta(2)-GPI using Pichia pastoris and studied its conformation and liposome-binding activity. Purified Domain V was found to have the native disulfide bonds. It had a compactly folded conformation, judging from the circular dichroism spectrum, and exhibited a cooperative unfolding transition induced by pH or urea. Also, it bound liposomes containing CL. Commercially available human beta(2)-GPI is known to be selectively cleaved between Lys 317 and Thr 318. We found that bovine factor Xa weakly but specifically cleaves the corresponding site of recombinant Domain V, i.e., the peptide bond between Lys 77 and Thr 78. The conformation of the ''nicked'' Domain V, which was cleaved at this site, was examined by circular dichroism and fluorescence measurements, and concluded to be similar to that of the intact protein. The stability of the nicked Domain V to urea was slightly lower than that of the intact protein. Although both Domains V bound to liposomes containing CL, the affinity of the nicked Domain V was greatly reduced in comparison with the intact protein, indicating that the cleavage of the peptide bond between Lys 77 and Thr 78 controls the binding to CL. In addition, analysis of the fluorescence spectra in the presence and absence of CL liposomes indicated that Trp 76 is involved in the binding site. These results suggest that the region including Trp 76, Lys 77, and Thr 78 has a critical role in binding to CL.

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  • Analysis of antibody production based on energy metabolism in hybridoma Reviewed

    K Furuichi, T Iemura, T Omasa, Y Katakura, K Suga

    ANIMAL CELL TECHNOLOGY: BASIC & APPLIED ASPECTS, VOL 8   261 - 265   1997

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    Language:English   Publishing type:Research paper (international conference proceedings)   Publisher:KLUWER ACADEMIC PUBL  

    Glucose or glutamine - limited continuous cultivation was carried out. At various steady state conditions, the specific antibody and ATP production rates were calculated under various specific growth rates. On the basis of these results, the ATP consumption rate for cell growth and antibody production was estimated. With the decrease of specific growth rate, the specific antibody production rate and the ATP proportion consumed in antibody production increased. In order to verify these analyses, the fluxes of the metabolic pathway in ATP production were calculated.

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  • Fed-batch culture strategy for high yield of baker’s yeast with high fermentative activity. Reviewed

    Y. Li, J. Chen, Q. Song, Y. Katakura, S. Lun

    Chinese Journal of Biotechnology   13, 160-167   1997

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  • Fluorescence polarization study of a salt bridge between a monoclonal antibody 3A21 and its antigen ribonuclease A. Reviewed

    Y. Katakura, T. Kumamoto, Y. Iwai, Y. Kurokawa, T. Omasa, K. Suga

    Molecular Immunology   34, 731-734   1997

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  • Cloning of cDNA and characterization of anti-RNase A monoclonal antibody 3A21 Reviewed

    Y Katakura, E Kobayashi, Y Kurokawa, T Omasa, K Fujiyama, KI Suga

    JOURNAL OF FERMENTATION AND BIOENGINEERING   82 ( 3 )   312 - 314   1996

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:SOC FERMENTATION BIOENGINEERING, JAPAN  

    Complementary DNA of the anti-bovine ribonuclease A monoclonal antibody 3A21 variable regions was cloned, sequenced and expressed as a single chain Fv phage antibody to investigate antibody-antigen interaction. The results of amino acid replacement experiments and changes in the affinity constant of the antibody 3A21 with change in pH, indicated that at least one electrostatic interaction participates in this antigen-antibody interaction.

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  • Modeling of penicillin G hydrolysis to 6-APA in an immobilized enzyme-ion exchange system. Reviewed

    J. Chen, T. Omasa, Y. Katakura, S. Shioya, K. Suga

    Chinese Journal of Biotechnology   11, 343-349   1995

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  • MOLECULAR-STRUCTURE OF A YEAST GENE, PDI1, ENCODING PROTEIN DISULFIDE ISOMERASE THAT IS ESSENTIAL FOR CELL-GROWTH Reviewed

    H TACHIKAWA, T MIURA, Y KATAKURA, T MIZUNAGA

    JOURNAL OF BIOCHEMISTRY   110 ( 2 )   306 - 313   1991.8

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    A genomic DNA clone for protein disulfide isomerase (PDI) of Saccharomyces cerevisiae was isolated by hybridization with synthesized oligonucleotide probes based on a partial amino acid sequence of yeast PDI. The introduction of a multiple copy plasmid carrying this fragment into yeast caused a tenfold increase in PDI specific activity and in the amount of PDI antigen in the extract. The gene on this fragment was named PDI1. The nucleotide sequence of the gene predicts a polypeptide of 522 amino acids with about 30% identity to mammalian PDIs. The predicted amino acid sequence contains an N-terminal signal peptide-like sequence, the C-terminal putative endoplasmic reticulum retention signal of yeast (HDEL), and two putative active site sequences of PDI (WCGHCK). The predicted polypeptide is acidic and contains five putative glycosylation sites, consistent with the molecular properties of the purified yeast PDI [T. Mizunaga et al. (1990) J. Biochem. 108, 846-851]. The PDI1 gene was mapped on chromosome III. A gene disruption experiment revealed that the PDI1 gene is essential for cell growth.

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  • PURIFICATION AND CHARACTERIZATION OF YEAST PROTEIN DISULFIDE ISOMERASE Reviewed

    T MIZUNAGA, Y KATAKURA, T MIURA, Y MARUYAMA

    JOURNAL OF BIOCHEMISTRY   108 ( 5 )   846 - 851   1990.11

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  • THE PRESENCE OF PROTEIN DISULFIDE ISOMERASE IN THE YEAST SACCHAROMYCES-CEREVISIAE Reviewed

    Y KATAKURA, T MIZUNAGA, T MIURA, Y MARUYAMA

    AGRICULTURAL AND BIOLOGICAL CHEMISTRY   54 ( 4 )   1043 - 1044   1990.4

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  • ENZYMATIC AND NUCLEOTIDE-SEQUENCE STUDIES OF A KANAMYCIN-INACTIVATING ENZYME ENCODED BY A PLASMID FROM THERMOPHILIC BACILLI IN COMPARISON WITH THAT ENCODED BY PLASMID PUB110 Reviewed

    M MATSUMURA, Y KATAKURA, T IMANAKA, S AIBA

    JOURNAL OF BACTERIOLOGY   160 ( 1 )   413 - 420   1984

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Books

  • 生産コストの計算

    片倉啓雄

    バイオリアクターのスケールアップと物質生産事例集. 技術情報協会  2021.4 

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  • 副生物を抑制した流加培養

    片倉啓雄

    バイオリアクターのスケールアップと物質生産事例集. 技術情報協会  2021.4 

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  • 研究公正に関するヒヤリ・ハット集

    片倉啓雄, 岡林浩嗣, 金井康郎( Role: Supervisor (editorial))

    国立研究開発法人日本医療研究開発機構  2020.3 

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  • 有用微生物培養のイロハ改定増補版

    片倉啓雄, 大政健史, 長沼孝文, 小野比佐好編( Role: Joint authorpp. 1-5, 18-87, 90, 101-106, 131, 139-167, 183-216, 222, 225-256, 265-280, 310-318, 353-354(367頁中205頁執筆, 初版に33頁加筆))

    エヌ・ティ・エス  2018 

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  • 乳酸菌と酵母との相互作用,および乳酸菌の炭水化物への接着現象の解析とプロバイオティクスへの応用

    谷口茉莉亜, 山崎(屋敷)思乃, 片倉啓雄

    酵母菌・麹菌・乳酸菌の産業応用展開, シーエムシー出版  2018 

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  • バイオ実験を安全に行うために

    片倉 啓雄( Role: Edit第3章, pp45-77(単著), 第4章, pp79-107(共著))

    化学同人  2018 

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  • 大学生のための「安全・安心」の基礎講座 第7講「個人にできること(Ⅰ)倫理・不正防止」 Reviewed

    片倉 啓雄

    日本国立大学協会編 Web教材  2015.4 

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  • 研究者に必要な生産コストの知識

    片倉 啓雄( Role: Sole author)

    生物工学会誌  2015 

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  • 有用微生物培養のイロハ

    片倉啓雄, 大政健史, 長沼孝文, 小野比佐好( Role: Joint authorpp. 1-5, 18-81, 93-98, 129-137, 153-185, 195-249, 280-288, 323-324(337頁中183頁執筆))

    エヌ・ティ・エス  2014.6 

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  • 実践・化学英語リスニング生化学編

    片倉啓雄( Role: Joint authorPart 2, Chapter 4〜6)

    化学同人  2014.4 

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  • 実践・化学英語リスニング生化学編Part 2, Chapter 4~6

    片倉啓雄( Role: Joint author)

    化学同人  2014.4 

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  • 大学生の学びを育む学習環境のデザイン「理工系多人数講義における効果的なグループ討論」

    片倉啓雄(pp.205-217(第11章))

    関西大学出版部  2014.3 

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  • 生物工学系の研究・開発の安全のために

    片倉 啓雄( Role: Sole author)

    生物工学会誌  2013 

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  • 遺伝子工学 第5章「遺伝子クローニング」

    片倉 啓雄( Role: Editpp. 68-82)

    東京化学同人  2012.3 

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  • 乳酸菌と酵母の共存と共生

    古川 壮一, 片倉 啓雄( Role: Joint author)

    生物工学会誌  2012 

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  • 乳酸菌と酵母の共存と共生

    古川壮一, 片倉啓雄( Role: Joint author)

    日本生物工学会誌  2012 

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  • 共生における接着の効果

    片倉 啓雄( Role: Sole author)

    生物工学会誌  2011 

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  • バイオ系実験安全オリエンテーション

    片倉啓雄, 山本仁( Role: Joint author97頁中95頁執筆)

    東京化学同人  2009 

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  • セルロース系バイオエタノール製造技術集成―食糧クライシス回避のために―「前処理および糖化の評価とプロセスの最適化」

    片倉 啓雄( Role: Editpp. 97-107(第2章))

    エヌ・ティー・エス  2009 

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  • ESP e-learning for global competency “English teaching for students in science and technology”

    片倉 啓雄( Role: Edit)

    Universal Academy Press, Inc  2008 

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  • バイオセンシングの化学工学

    片倉 啓雄( Role: Sole author)

    化学工学  2008 

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  • 安全倫理

    片倉啓雄, 堀田源治( Role: Joint author)

    培風館  2008 

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  • Biotechnology Basic

    片倉啓雄, 藤山和仁, 西川美香子, 福井希一( Role: Joint author)

    大阪大学  2006 

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  • 「世界に通用するProfessional Engineerを育てるための安全教育」報告書

    片倉 啓雄( Role: Joint translator)

    三恵社  2006 

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  • バイオプロダクション「パン酵母生産」

    片倉 啓雄( Role: Joint authorpp. 162-166(第9章2節))

    コロナ社  2006 

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  • 生物工学ハンドブック「工学倫理」

    片倉 啓雄( Role: Editpp 828-832)

    コロナ社  2005 

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  • Biotechnology英会話

    片倉啓雄, 藤山和人, 西川美香子, 福井希一( Role: Joint author)

    大阪大学  2005 

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  • 抗体エンジニアリングの最前線「抗原抗体反応の実践的速度論」

    片倉 啓雄( Role: Edit第2章, pp10-16)

    シーエムシー  2004 

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  • 乳酸菌と酵母の共培養による有用物質生産

    片倉 啓雄( Role: Joint author)

    生物工学会誌  2004 

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  • コンビナトリアル・バイオエンジニアリング「ファージを用いたシステム−リガンドのスクリーニングとその応用におけるkinetics」

    片倉 啓雄( Role: Editpp 27-34)

    化学同人  2003 

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  • 生物工学実験書(改訂版)「インターネットによる情報検索」

    片倉 啓雄( Role: Editpp449-450 (第7章3節-2))

    培風館  2002 

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  • センシングにおけるリガンド-ターゲット相互作用の反応速度論

    片倉 啓雄( Role: Joint author)

    ケミカルエンジニアリング  2002 

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  • ファージディスプレイによる新機能分子の創出

    片倉 啓雄( Role: Sole author)

    化学と生物  2002 

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  • バイオプロセスシステムエンジニアリング「抗体の単離及びその応用におけるモデリング」

    片倉 啓雄( Role: Editpp 79-88)

    シーエムシー  2002 

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  • 生物工学実験書(改訂版)「インターネットの利用」

    片倉 啓雄( Role: Editpp 449 (第7章3節-1))

    培風館  2002 

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  • 生物工学実験書(改訂版)「指数流加培養によるパン酵母流加培養制御」

    片倉 啓雄( Role: Editpp377-380 (第5章11節-2))

    培風館  2002 

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  • コンビナトリアルサイエンスの新展開「ファージライブラリーから効率よくリガンドを単離するための実践的な戦略」

    片倉 啓雄( Role: Editpp 304-317)

    シーエムシー  2002 

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  • バイオ実験のツボ-酵素活性の測定(1)

    片倉 啓雄( Role: Sole author)

    化学  2001 

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  • バイオ実験のツボ-実験方法の調べ方

    片倉 啓雄( Role: Sole author)

    化学  2001 

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  • バイオ実験のツボ-核酸の抽出,精製,定量

    片倉 啓雄( Role: Sole author)

    化学  2001 

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  • バイオ実験のツボ-タンパク質の電気泳動

    片倉 啓雄( Role: Sole author)

    化学  2001 

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  • バイオ実験のツボ-核酸の電気泳動

    片倉 啓雄( Role: Sole author)

    化学  2001 

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  • バイオ実験のツボ-酵素活性の測定(2)

    片倉 啓雄( Role: Sole author)

    化学  2001 

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  • ファージライブラリーのアフィニティ選択理論

    片倉 啓雄( Role: Joint author)

    Bioindustry  2001 

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  • バイオ実験のツボ-タンパク質の定量

    片倉 啓雄( Role: Sole author)

    化学  2001 

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  • バイオ実験のツボ-遠心分離

    片倉 啓雄( Role: Sole author)

    化学  2001 

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  • バイオ実験のツボ-試料の濃縮脱塩

    片倉 啓雄( Role: Sole author)

    化学  2001 

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  • バイオ実験のツボ-試料の保存

    片倉 啓雄( Role: Sole author)

    化学  2001 

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  • タンパク質のファージディスプレイシステム

    片倉 啓雄( Role: Joint author)

    現代化学  2001 

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  • バイオ実験のツボ-植菌(2)

    片倉 啓雄( Role: Sole author)

    化学  2000 

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  • バイオ実験のツボ-植菌(1)

    片倉 啓雄( Role: Sole author)

    化学  2000 

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  • バイオ実験のツボ-培地の調製

    片倉 啓雄( Role: Sole author)

    化学  2000 

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  • バイオ実験のツボ-緩衝液の調製

    片倉 啓雄( Role: Sole author)

    化学  2000 

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  • バイオ実験のツボ-計量,調製

    片倉 啓雄( Role: Sole author)

    化学  2000 

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  • バイオ実験のツボ-培養

    片倉 啓雄( Role: Sole author)

    化学  2000 

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  • ファージディスプレイシステムを用いたアフィニティリガンドの創製.

    片倉 啓雄( Role: Sole author)

    生産と技術  1998 

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  • BEACONによる抗原抗体反応の解析.

    片倉 啓雄( Role: Sole author)

    Bioview  1997 

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  • ペプチドの構造変化を利用したアフィニティ調節

    片倉 啓雄( Role: Joint author)

    バイオサイエンスとインダストリー  1997 

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  • バイオ研究データブック酵母編「酵母のタンパク質分泌の翻訳後修飾の問題について」

    片倉 啓雄( Role: Editpp 9-15)

    医学出版センター  1990 

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  • Protein disulfide isomerase

    KATAKURA,Yoshio( Role: Sole author)

    発酵工学会誌  1990 

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MISC

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Presentations

  • 研究者倫理教育にグループワークを導入する

    片倉啓雄

    2019.9 

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    Event date: 2019.9

    Venue:大手町ファ-ストスクエアカンファレンス  

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  • 科学者の責務とWell-Being~いかにして気づかせ、考えさせるか~-グループディスカッションの実践-

    片倉啓雄

    2018.11 

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    Event date: 2018.11

    Venue:大手町ファ-ストスクエアカンファレンス  

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  • 術者倫理教育の目的は何か

    片倉啓雄

    2015.5 

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    Event date: 2015.5

    Venue:姫路商工会議所  

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  • コーヒー粕由来コーヒーマンナンの構造解析と乳化特性

    笹川貴司, 片倉啓雄, 河原秀久

    日本食品工学会第14回年次大会  2013.8 

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    Event date: 2013.8

    Venue:京都テルサ  

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  • Analysis and optimization of biopanning process of phage display libraries.

    KATAKURA,Yoshio

    2002 

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    Event date: 2002

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  • Efficient production of lactic acid bacteria by aerobic fed-batch culture

    KATAKURA,Yoshio

    2021.11 

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    Venue:オンライン(日本)  

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  • キシロースを資化するSaccharomyces cerevisiaeの非組換え育種の試み

    平松孝太郎, 頓名 洋, 今野紗希, 東原成美, 山崎思乃, 片倉啓雄

    日本生物工学会第71回大会  2019.9 

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:岡山大学  

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  • レアメーティングにより造成した酵母の耐熱性とエタノール耐性の評価

    高橋 葵, 海道直生, 山崎思乃, 片倉啓雄

    日本生物工学会第71回大会  2019.9 

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:岡山大学  

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  • Lactobacillus sakei由来メンブランベシクルによるIgA産生促進メカニズムの解明

    三好柚紀, 井谷彩乃, 雑賀あずさ, 長竹貴広, 松永安由, 國澤 純, 片倉啓雄, 山崎思乃

    日本生物工学会第71回大会  2019.9 

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:岡山大学  

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  • Lactobacillus antriが産生するメンブランベシクルのIgA産生促進作用の解析

    佐々木晴菜, 仲田真穂, 前田新一, 雑賀あずさ, 國澤 純, 片倉啓雄, 山崎思乃

    日本生物工学会第71回大会  2019.9 

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:岡山大学  

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  • 蛍光式溶存酸素センサーを使用した呼吸活性の測定法

    高寺美砂都, 一瀬 涼, 山崎思乃, 片倉啓雄

    日本生物工学会第71回大会  2019.9 

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:岡山大学  

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  • 乳酸菌の高密度培養のための好気的流加培養による乳酸生産の抑制

    一瀬 涼, 高寺美砂都, 山崎思乃, 片倉啓雄

    日本生物工学会第71回大会  2019.9 

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:岡山大学  

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  • 科学者のWell-beingのための志向倫理 Invited

    片倉啓雄

    新潟大学研究倫理セミナー  2019.9 

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    Language:Japanese   Presentation type:Public lecture, seminar, tutorial, course, or other speech  

    Venue:新潟大学五十嵐キャンパス  

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  • 科学者のWell-beingのための志向倫理 Invited

    片倉啓雄

    新潟大学研究倫理セミナー  2019.9 

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    Language:Japanese   Presentation type:Public lecture, seminar, tutorial, course, or other speech  

    Venue:新潟大学旭町キャンパス  

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  • 研究者倫理教育にグループワークを導入する Invited

    片倉啓雄

    第2回 JSPS 研究倫理セミナー  2019.9 

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    Language:Japanese   Presentation type:Public lecture, seminar, tutorial, course, or other speech  

    Venue:大手町ファ−ストスクエアカンファレンス  

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  • 固体連続並行複発酵による古紙からのエタノール生産

    岸岡拓哉, 山崎(屋敷)思乃, 片倉啓雄

    セルラーゼ研究会  2019.8 

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    Language:Japanese   Presentation type:Poster presentation  

    Venue:佐久平  

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  • The influence of specific growth rate to lactate production on aerobic fed-batch culture of lactic acid bacteriai. International conference

    M. Kawai, A. Tsuchiya, J. Ishida, N. Yoda, S. Yashiki-Yamasaki, Y. Katakura

    The 14th International Symposium in Science and Technology  2019.8 

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    Language:English   Presentation type:Poster presentation  

    Venue:Thailand  

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  • ビフィズス菌と食物繊維の接着現象の解析

    谷口茉莉亜, 南部美乃莉, 山崎(屋敷)思乃, 片倉啓雄

    日本乳酸菌学会大会  2019.7 

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:岐阜市  

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  • Lactococcus lactis の好気的流加培養による乳酸生産の抑制

    佐野杏奈, 河合美桜, 土屋麻美, 石田淳也, 依田伸生, 山崎(屋敷)思乃, 片倉啓雄

    日本乳酸菌学会大会  2019.7 

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:岐阜市  

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  • 乳酸菌の好気的流加培養における比増殖速度が乳酸生産に与える影響

    河合美桜, 土屋麻美, 石田淳也, 依田伸生, 山崎(屋敷)思乃, 片倉啓雄

    日本乳酸菌学会大会  2019.7 

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:岐阜市  

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  • 乳酸菌の高密度培養のための好気的流加培養による乳酸生産の抑制

    一瀬涼, 山崎(屋敷)思乃, 片倉啓雄

    2019.5 

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:松山  

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  • 乳酸菌の好気的流加培養による乳酸生産抑制

    一瀬涼, 垣本智美, 山崎(屋敷)思乃, 片倉啓雄

    日本農芸化学会大会  2019.3 

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:東京農業大学  

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  • 志向倫理的観点からの工学教育−社会の安全・安心に貢献する− Invited

    片倉啓雄

    熊本工業高等専門学校教員研修  2019.3 

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    Language:Japanese   Presentation type:Public lecture, seminar, tutorial, course, or other speech  

    Venue:熊本工業高等専門学校  

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  • 科学者のWell-beingのための志向倫理 Invited

    片倉啓雄

    大正大学研究倫理講習  2019.2 

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    Language:Japanese   Presentation type:Public lecture, seminar, tutorial, course, or other speech  

    Venue:大正大学  

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  • 科学者と志向倫理 Invited

    片倉啓雄

    東京医科大学研究倫理講習  2019.2 

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    Language:Japanese   Presentation type:Public lecture, seminar, tutorial, course, or other speech  

    Venue:東京医科大学  

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  • 科学者のWell-beingのための志向倫理 Invited

    片倉啓雄

    徳島大学研究倫理講習  2019.2 

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    Language:Japanese   Presentation type:Public lecture, seminar, tutorial, course, or other speech  

    Venue:徳島大学  

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  • 科学に携わる者のための倫理−技術者倫理教育の視点から− Invited

    片倉啓雄

    日本生命倫理学会 第30回年次大会研究公正シンポジウム  2018.12 

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    Language:Japanese   Presentation type:Symposium, workshop panel (nominated)  

    Venue:京都府立医科大学  

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  • 科学者の責務とWell-Being〜いかにして気づかせ、考えさせるか〜−グループディスカッションの実践− Invited

    片倉啓雄

    第1回 JSPS 研究倫理セミナー  2018.11 

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    Language:Japanese   Presentation type:Public lecture, seminar, tutorial, course, or other speech  

    Venue:大手町ファ−ストスクエアカンファレンス  

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  • 研究倫理と志向倫理−単なる研究不正防止を越えて− Invited

    片倉啓雄

    日本工学教育協会 第4回ワークショップ「研究倫理」  2018.11 

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    Language:Japanese   Presentation type:Symposium, workshop panel (nominated)  

    Venue:東京工業大学田町キャンパス  

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  • 科学に携わる者のための倫理〜技術者倫理教育の視点から〜 Invited

    片倉啓雄

    横浜市立大学コンプライアンスセミナー  2018.9 

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    Language:Japanese   Presentation type:Public lecture, seminar, tutorial, course, or other speech  

    Venue:横浜市立大学  

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  • 潜性形質に注目したレアメーティングによる非遺伝子組換え酵母の育種

    海道直生, 金子嘉信, 山崎(屋敷)思乃, 片倉啓雄

    日本生物工学会第70回大会  2018.9 

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:関西大学  

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  • グルコースリプレッションを回避する流加培養による乳酸菌の乳酸生産抑制

    河合美桜, 土屋麻美, 依田伸生, 山崎(屋敷)思乃, 片倉啓雄

    日本生物工学会第70回大会  2018.9 

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:関西大学.  

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  • 生物工学系の研究・開発の安全のために−基本的な考え方と実践例− Invited

    片倉啓雄

    日本生物工学会大会ワークショップ  2018.9 

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    Language:Japanese   Presentation type:Symposium, workshop panel (nominated)  

    Venue:関西大学  

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  • Streptococcus zooepidemicusによるヒアルロン酸生産の最適化

    小川愛未, 小野聡子, 成田琴美, 武内章, 山崎(屋敷)思乃, 片倉啓雄

    日本生物工学会第70回大会  2018.9 

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:関西大学  

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  • スクロースを糖源とした乳酸菌培養による乳酸生産抑制

    佐野杏奈, 河合美桜, 土屋麻美, 依田伸生, 山崎(屋敷)思乃, 片倉啓雄

    日本生物工学会第70回大会  2018.9 

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:関西大学.  

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  • Lactobacillus sakei由来メンブランベシクルを介するIgA産生促進作用の解析

    三好柚紀, 山崎(屋敷)思乃, 中山知哉, 國澤純, 片倉啓雄

    日本生物工学会第70回大会  2018.9 

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:関西大学  

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  • 腸内細菌と食物繊維の接着現象の解析

    谷口茉莉亜, 倉光香奈, 山崎(屋敷)思乃, 片倉啓雄

    日本生物工学会第70回大会  2018.9 

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:関西大学  

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  • 志向倫理教育の実践例―ルールを提案できる人材の育成―

    片倉啓雄

    平成30年度工学教育研究講演会  2018.8 

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:名古屋工業大学科学に携わる者のための倫理−技術者倫理教育の視点から−  

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  • Enhancement of intestinal IgA production by membrane vesicles derived from Lactobacillus sakei International conference

    S. Yamasaki-Yashiki, Y. Miyoshi, J. Kunisawa, Y. Katakura

    The 13th International Symposium in Science and Technology  2018.8 

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    Language:English   Presentation type:Poster presentation  

    Venue:Taiwan  

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  • 科学に携わる者のための倫理−技術者倫理教育の視点から− Invited

    片倉啓雄

    豊田中央研究所研究倫理研修  2018.8 

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    Language:Japanese   Presentation type:Public lecture, seminar, tutorial, course, or other speech  

    Venue:豊田中央研究所  

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  • 科学に携わる者のための倫理〜技術者倫理教育の視点から〜 Invited

    片倉啓雄

    京都府立医科大学倫理研修会  2018.7 

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    Language:Japanese   Presentation type:Public lecture, seminar, tutorial, course, or other speech  

    Venue:京都府立医科大学  

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  • スクロースの流加による乳酸菌の乳酸生産抑制

    河合美桜, 土屋麻美, 依田伸生, 山崎(屋敷)思乃, 片倉啓雄

    日本乳酸菌学会大会  2018.7 

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:東京農業大学  

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  • 科学に携わる者のための倫理 Invited

    片倉啓雄

    千葉市医師会医療安全講習会  2018.6 

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    Language:Japanese   Presentation type:Public lecture, seminar, tutorial, course, or other speech  

    Venue:千葉市総合保健医療センター  

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  • 乳酸菌Lactobacillus sakeiが産生するメンブランベシクルの免疫調節作用の解析

    三好柚紀, 山崎(屋敷)思乃, 仲田真穂, 中山知哉, 國澤純, 片倉啓雄

    日本乳酸菌学会泊り込みセミナー  2018.5 

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:北広島クラッセホテル  

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  • 科学に携わる者のための倫理 Invited

    片倉啓雄

    川崎医療福祉大学平成30年度コンプライアンス研修  2018.5 

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    Language:Japanese   Presentation type:Public lecture, seminar, tutorial, course, or other speech  

    Venue:川崎医療福祉大学  

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  • 志向倫理教育の実践例 Invited

    片倉啓雄

    日本工学教育協会 第3回ワークショップ「研究倫理」  2018.2 

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    Language:Japanese   Presentation type:Symposium, workshop panel (nominated)  

    Venue:金沢大学東京虎ノ門キャンパス  

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  • 科学に携わる者の倫理―技術者倫理の視点から― Invited

    片倉啓雄

    日本医療研究開発機構(AMED), 研究公正シンポジウム  2017.11 

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    Language:Japanese   Presentation type:Symposium, workshop panel (nominated)  

    Venue:東京・北とぴあ  

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  • 科学に携わる者の倫理―技術者倫理の視点から― Invited

    片倉啓雄

    第31回日本耳鼻咽喉科学会専門医講習会  2017.11 

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    Venue:神戸ポートピアホテル  

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  • 科学に携わる者の倫理―技術者倫理の視点から― Invited

    片倉啓雄

    第31回日本耳鼻咽喉科学会専門医講習会  2017.11 

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    Venue:神戸ポートピアホテル  

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  • 技術者・研究者が知るべき倫理−あなたのWell-beingのために− Invited

    片倉啓雄

    有明工業高等専門学校  2017.10 

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    Language:Japanese   Presentation type:Public lecture, seminar, tutorial, course, or other speech  

    Venue:有明高等専門学校  

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  • 乳酸菌培養における乳酸生産の抑制

    河合美桜, 原田里紗, 土屋麻美, 依田伸生, 山崎(屋敷)思乃, 福崎英一郎, 片倉啓雄

    日本生物工学会第69回大会  2017.9 

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    Venue:早稲田大学  

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  • Lactobacillus reuteriのグリセリン共流加による乳酸生産の抑制

    一瀬涼, 福田雄一, 山崎(屋敷)思乃, 片倉啓雄

    日本生物工学会第69回大会  2017.9 

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    Venue:早稲田大学  

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  • 乳酸菌と食物繊維およびムチンとの相互作用の解析

    山崎(屋敷)思乃, 倉光香奈, 谷口茉莉亜, 片倉啓雄

    日本生物工学会第69回大会  2017.9 

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    Venue:早稲田大学  

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  • 技術者・研究者が知るべき倫理−あなたのWell-beingのために− Invited

    片倉啓雄

    信州大学研究者倫理特別講義  2017.6 

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    Language:Japanese   Presentation type:Public lecture, seminar, tutorial, course, or other speech  

    Venue:信州大学  

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  • 受講者の価値観に刺激を与える授業方法 Invited

    片倉啓雄

    日本工学教育協会 第17回ワークショップ「技術者倫理」  2017.2 

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    Language:Japanese   Presentation type:Symposium, workshop panel (nominated)  

    Venue:東京工業大学  

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  • 研究倫理をどのように教えるか−技術者倫理教育の視点から− Invited

    片倉啓雄

    日本医療研究開発機構(AMED) RIOネットワーク意見聴取会  2017.1 

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    Language:Japanese   Presentation type:Symposium, workshop panel (nominated)  

    Venue:東京・大手町  

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  • 研究倫理をどのように教えるか−技術者倫理教育の視点から− Invited

    片倉啓雄

    日本医療研究開発機構(AMED) RIOネットワーク意見聴取会  2016.12 

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    Language:Japanese   Presentation type:Symposium, workshop panel (nominated)  

    Venue:新大阪・CICI研修センター  

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  • Characterization and modulation of cell wall components of Lactobacillus antri for the enhanced production of intestinal IgA antibody International conference

    S. Yamasaki-Yashiki, T. Toramoto, J. Kunisawa, Y. Katakura

    5th AFSLAB International Symposium  2016.11 

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    Venue:Taiwan  

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  • Lactococcus lactisのナイシン高生産株スクリーニング系の開発

    三田麻友華, 山本理奈, 大島悟, 依田伸生, 山崎(屋敷)思乃, 片倉啓雄

    日本生物工学会第68回大会  2016.9 

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    Venue:富山国際会議場  

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  • IgA産生を増強するLactobacillus antriの細胞壁成分の解析

    寅本拓, 山崎(屋敷)思乃, 國澤純, 片倉啓雄

    日本生物工学会第68回大会  2016.9 

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    Venue:富山国際会議場  

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  • 技術者倫理への動機づけを高める指導法 Invited

    片倉啓雄

    日本工学教育協会 第16回ワークショップ「技術者倫理」  2015.12 

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    Language:Japanese   Presentation type:Symposium, workshop panel (nominated)  

    Venue:東京工業大学大岡山キャンパス  

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  • エノキタケ子実体由来熱水可溶性接着タンパク質の同定とその機能

    楮畑智代, 山崎(屋敷)思乃, 片倉啓雄, 河原秀久, 小出芳栄

    日本生物工学会第67回大会  2015.10 

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:鹿児島城山観光ホテル  

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  • 酵母の固体培養における呼吸商を指標にした細胞状態の推定

    山崎(屋敷)思乃, 上田賢佳, 真田三希, 片倉啓雄

    日本生物工学会第67回大会  2015.10 

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    Venue:鹿児島城山観光ホテル  

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  • 志向倫理とキャリア教育 : 社会の安全に貢献するというgood workに気づかせる

    片倉啓雄

    平成27年度工学教育研究講演会  2015.9 

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:九州大学  

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  • Intestinal IgA enhancement by three Lactobacilli through toll-like receptor 2 activation on dendritic cells in the Peyer's patches. International conference

    S. Yamasaki-Yashiki, A. Saika, J. Kunisawa, Y. Katakura

    The 8th Asian Conference on Lactic Acid Bacteria  2015.7 

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    Language:English   Presentation type:Poster presentation  

    Venue:Bangkok, Thailand  

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  • 技術者倫理教育の目的は何か Invited

    片倉啓雄

    日本トライボロジー学会2015年会  2015.5 

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    Language:Japanese   Presentation type:Oral presentation (invited, special)  

    Venue:姫路商工会議所  

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  • 技術者・研究者にとってののwell-beingとは Invited

    片倉啓雄

    日本乳酸菌学会泊り込み研究会  2015.5 

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    Language:Japanese   Presentation type:Oral presentation (invited, special)  

    Venue:サンライズ淡路  

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  • 技術者倫理への動機づけをはかる授業例 Invited

    片倉啓雄

    日本工学教育協会 第15回ワークショップ「技術者倫理」  2014.12 

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    Language:Japanese   Presentation type:Symposium, workshop panel (nominated)  

    Venue:金沢大学東京虎ノ門キャンパス  

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  • レアメーティングによるバイオエタノール生産に適した酵母の育種

    松原 巧, 山崎(屋敷)思乃, 河原秀久, 金子嘉信, 片倉啓雄

    日本生物工学会第66回大会  2014.9 

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    Venue:札幌国際会議場  

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  • いかにして技術者の責務とやりがいに気付かせるか Invited

    片倉啓雄

    日本電気学会全国大会シンポジウム  2014.3 

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    Venue:愛媛大学  

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  • キャリアデザインと技術者倫理 Invited

    片倉啓雄

    電気学会教育フロンティア研究会  2013.12 

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    Venue:関西大学  

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  • 培養時の水分が乳酸菌の増殖と代謝に及ぼす影響

    菅野勇樹, 中村惇志, 安田 智, 河原秀久, 片倉啓雄

    日本生物工学会第65回大会  2013.9 

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    Venue:広島国際会議場  

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  • コーヒー粕からの過冷却促進物質の抽出とその機能・構造解析

    濱田 純, 笹川貴司, 片倉啓雄, 河原秀久

    環境技術学会第14回年次大会  2013.9 

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    Venue:岐阜大学  

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  • コーヒー粕由来コーヒーマンナンの構造解析と乳化特性

    笹川貴司, 片倉啓雄, 河原秀久

    日本食品工学会第14回年次大会  2013.8 

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    Venue:京都テルサ  

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  • より効果的にグループ討議を進めるための準備−メッセンジャーシステムを導入した大人数クラスでのグループ討論− Invited

    片倉啓雄

    日本工学教育協会 第14回ワークショップ「技術者倫理」  2012.11 

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    Language:Japanese   Presentation type:Symposium, workshop panel (nominated)  

    Venue:東京大学  

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  • グルタミン酸添加によるUreibacillus thermosphaericusの脱リグニン活性の向上

    原田里紗, 片倉啓雄, 関野宏紀, 紀ノ岡正博

    日本生物工学会大会  2012.10 

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  • Ethanol production from biomass using consolidated continuous solid-state fermentation system. International conference

    C. Moukamnerd, Y. Katakura

    XII International Symposium on Environmental Geotechnology, Energy and Global Sustainable Development  2012.6 

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    Venue:Los Angeles  

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  • 実験系学部の安全教育 …無知の罪を知り、既知の危険を学び、未知の危険に対処する人材を育てるために Invited

    片倉啓雄

    日本鉄鋼協会第163回春季講演大会  2012.3 

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    Language:Japanese   Presentation type:Oral presentation (invited, special)  

    Venue:横浜国立大学  

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  • 緑豆由来の不凍タンパク質の分離とその諸性質

    中地 学, 片倉 啓雄, 河原 秀久, 荒井 直樹

    日本農芸化学会大会  2012.3 

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  • 低温馴化エノキタケ子実体由来脂溶性物質の機能評価とその構造解析

    田村 淑恵, 加藤 静香, 片倉 啓雄, 河原 秀久, 竹森 洋, 小出 芳栄

    日本農芸化学会大会  2012.3 

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  • 乳酸菌の他細胞への接着と応答

    片倉啓雄

    日本生物工学会平成23年度大会  2011.9 

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    Venue:東京農工大学  

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  • 基質結合部位の除去がcellobiohydrolase Iの比活性に及ぼす影響

    片倉啓雄, 橋爪祥輝, 紀ノ岡正博

    日本生物工学会平成23年度大会  2011.9 

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    Venue:東京農工大学  

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  • Genes of Lactobacillus casei induced by adhesion to yeast. International conference

    Y. Yamamoto, H. Sawada, M. Kino-oka, Y. Katakura

    The 6th Asian Conference on Lactic Acid Bacteria  2011.8 

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    Venue:Sapporo, JAPAN  

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  • Lactic acid bacteria display on the cell surface cytosolic proteins that recognize carbohydrates including mannan, cellulose and mucin. International conference

    Y. Katakura, T. Hashimoto, A. Uematsu, M. Kino-oka

    The 6th Asian Conference on Lactic Acid Bacteria  2011.8 

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    Venue:Sapporo, JAPAN  

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  • 乳酸菌と種々の炭水化物の相互作用の解析

    植松亜弥, 田中祥之, 紀ノ岡正博, 片倉啓雄

    日本乳酸菌学会2011年度大会  2011.7 

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    Venue:関西大学  

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  • 酵母との接触が引き起こす乳酸菌の遺伝子発現の解析

    片倉啓雄, 澤田浩志, 山本由佳, 紀ノ岡正博

    日本乳酸菌学会2011年度大会  2011.7 

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    Venue:関西大学  

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  • Ethanol production from biomass by consolidated continuous solid state fermentation system. International conference

    KATAKURA,Yoshio

    Asian Congress on Biotechnology 2011  2011.5 

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    Venue:Shanghai, CHINA  

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  • 植物種子由来不凍タンパク質の検索とその分離

    中地 学, 小林 大基, 片倉 啓雄, 河原 秀久

    日本農芸化学会大会  2011.3 

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  • 市販キノコの細胞壁成分中の不凍活性の検索

    河原 秀久, 入江 めぐみ, 佐藤 才治, 阪口 拓也, 片倉 啓雄, 小出 芳栄

    日本農芸化学会大会  2011.3 

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  • エノキタケ細胞壁成分キシロマンナン画分の不凍活性

    藤川 和平, 坂口 拓也, 片倉 啓雄, 河原 秀久, 小出 芳栄

    日本農芸化学会大会  2011.3 

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  • 高温・酸・エタノール耐性を持つ高発酵性酵母のゲノム育種

    長谷川大介, 横田大樹, 杉山峰崇, 金子嘉信, 片倉啓雄, Chuenchit Boonchird, 原島俊

    日本生物工学会平成22年度大会  2010.10 

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    Venue:宮崎市  

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  • 乳酸菌と炭水化物の相互作用

    片倉啓雄, 橋本高志, 植松亜弥, 田中祥之, 紀ノ岡正博

    日本生物工学会平成22年度大会  2010.10 

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    Venue:宮崎市  

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  • 乳酸菌と炭水化物の相互作用

    片倉啓雄, 橋本高志, 田中祥之, 植松亜弥, 紀ノ岡正博

    日本生物工学会乳酸菌・腸内細菌工学研究部会講演会  2010.5 

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    Venue:帯広  

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  • 倫理的問題が生じる背景と今時の学生の気質 Invited

    片倉啓雄

    日本工学教育協会 第10回ワークショップ「技術者倫理」  2010.2 

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    Language:Japanese   Presentation type:Symposium, workshop panel (nominated)  

    Venue:金沢大学東京虎ノ門キャンパス  

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  • 技術者倫理教育の目的は何か−社会の安全・安心との関連を中心に考える− Invited

    片倉啓雄

    電気学会教育フロンティア研究会  2009.12 

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    Venue:福井大学.  

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  • 安全を保証される立場から保証する立場へ−安全教育と技術者倫理教育の融合− Invited

    片倉啓雄

    第3回専門職・技術者倫理ワークショップ  2009.11 

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    Venue:宮崎大学  

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  • 固体連続併行復発酵によるバイオエタノール生産

    片倉啓雄, Moukamnerd Churairat, 岸本淳平, 紀ノ岡正博, 金子嘉信, 原島俊, 大道徹太郎, 平尾桂一, 野田秀夫, 仁宮一章, 塩谷捨明

    日本生物工学会平成21年度大会  2009.9 

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    Venue:名古屋大学  

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  • 乳酸菌と炭水化物の接着機構の解析

    橋本高志, 植松亜弥, 仁宮 一章, 塩谷 捨明, 紀ノ岡正博, 片倉啓雄

    日本生物工学会平成21年度大会  2009.9 

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    Venue:名古屋大学  

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  • 乳酸菌Lactococcus lactisのナイシン生合成経路における律速段階の解析

    仁宮一章, 野口智子, 片倉啓雄, 塩谷捨明

    日本生物工学会平成21年度大会  2009.9 

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    Venue:名古屋大学  

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  • 酵母に表層提示される糖化酵素のみかけの活性に及ぼす糖鎖修飾の影響

    片倉啓雄, 加藤真由, 仁宮一章, 近藤昭彦, 植田充美, 塩谷捨明

    日本生物工学会平成21年度大会  2009.9 

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    Venue:名古屋大学  

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  • 大学での安全教育−学生自身に気づかせ、考えさせ、実践させる− Invited

    片倉啓雄

    日本鉄鋼協会第157回春季講演大会  2009.3 

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    Venue:東京工業大学  

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  • Ethanol production from biomass by Consolidated Continuous Solid State Fermentation System

    Moukamnerd Churairat, 原田佳苗, 大道徹太郎, 平尾桂一, 片倉啓雄, 仁宮一章, 塩谷捨明

    化学工学会第73年会  2009.3 

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    Venue:横浜国立大学  

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  • CO2要求性ビフィズス菌における13CO2を用いた代謝解析

    片倉啓雄, 川畑隆司, 仁宮一章, 金谷 忠, 河野麻美子, 浅田雅宣, 塩谷捨明

    化学工学会第73年会  2009.3 

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    Venue:横浜国立大学  

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  • 乳酸菌と酵母の接着とその効果 Invited

    片倉啓雄

    日本農芸化学会2009年度大会(招待講演)  2009.3 

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    Venue:福岡国際会議場.  

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  • 安全倫理−気づかせ、考えさせ、実践させる− Invited

    片倉啓雄

    日本工学教育協会 第9回ワークショップ「技術者倫理」  2009.2 

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    Language:Japanese   Presentation type:Symposium, workshop panel (nominated)  

    Venue:日本大学理工学部  

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  • 安全倫理−社会の安全・安心のための基本をどのように教えるか− Invited

    片倉啓雄

    日本鉄鋼協会安全・快適なシステム構築研究フォーラム 第13回公開セミナー  2008.11 

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    Venue:日本鉄鋼協会  

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  • 技術者倫理教育と安全教育との融合−技術者が知るべき実践的安全倫理−

    片倉啓雄

    平成20年度工学・工業教育研究講演会  2008.8 

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    Language:Japanese   Presentation type:Oral presentation (general)  

    Venue:神戸大学.  

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  • 安全を保証される立場から保証する立場へ Invited

    片倉啓雄

    日本工学教育協会 第8回ワークショップ「技術者倫理」  2008.2 

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    Language:Japanese   Presentation type:Symposium, workshop panel (nominated)  

    Venue:日本大学理工学部  

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  • 大学の安全と社会の安全 Invited

    片倉啓雄

    青山学院大学理工学部  2007.11 

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    Language:Japanese   Presentation type:Public lecture, seminar, tutorial, course, or other speech  

    Venue:青山学院大学相模原キャンパス  

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  • 工学倫理教育とバイオテクノロジー Invited

    片倉啓雄

    平成20年度日本機械学会大会  2007.9 

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    Language:Japanese   Presentation type:Oral presentation (invited, special)  

    Venue:関西大学.  

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  • 大学の安全と社会の安全 Invited

    片倉啓雄

    第1回大阪大学工学研究科技術部技術職員研修  2007.9 

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    Language:Japanese   Presentation type:Public lecture, seminar, tutorial, course, or other speech  

    Venue:大阪大学.  

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  • 安全にはトップダウンとボトムアップの双方が必要−学生に能動的に安全活動に参加させるには− Invited

    片倉啓雄

    私立大学環境保全協議会第22回夏期研修研究会  2007.8 

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    Language:Japanese   Presentation type:Public lecture, seminar, tutorial, course, or other speech  

    Venue:同志社大学  

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  • 生化学系実験の安全−事故事例とその対策− Invited

    片倉啓雄

    東京大学工学研究科安全講習  2007.6 

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    Language:Japanese   Presentation type:Public lecture, seminar, tutorial, course, or other speech  

    Venue:東京大学工学研究科  

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  • 技術者教育における安全とは−大阪大学での実践例− Invited

    片倉啓雄

    愛媛大学農学部安全講習  2007.3 

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    Language:Japanese   Presentation type:Public lecture, seminar, tutorial, course, or other speech  

    Venue:愛媛大学農学部.  

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  • 研究室での安全への取り組み−大阪大学での好事例を中心に− Invited

    片倉啓雄

    第2回安心と安全のための教育シンポジウム「安全・安心な教育研究環境を実現するには」  2007.1 

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    Language:Japanese   Presentation type:Symposium, workshop panel (nominated)  

    Venue:大阪大学  

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  • 大阪大学工学部応用自然科学系の技術者倫理教育−気づかせ,考えさせるボトムアップ的な安全・倫理教育を目指して− Invited

    片倉啓雄

    第1回室蘭工業大学特色GPシンポジウム「技術者倫理教育の現状と課題」  2006.12 

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    Language:Japanese   Presentation type:Symposium, workshop panel (nominated)  

    Venue:室蘭工業大学.  

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  • 学生自身に考えさせるボトムアップ的な安全・倫理教育を目指して Invited

    片倉啓雄

    第1回安心と安全のための教育シンポジウム「教え子の安全・安心・健康への感性を高めるには」  2006.1 

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    Language:Japanese   Presentation type:Symposium, workshop panel (nominated)  

    Venue:大阪大学  

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  • 工学における安全と倫理−応用生物工学専攻での授業コンテンツ Invited

    片倉啓雄

    ワークショップ「技術者倫理の構築」  2004.1 

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    Language:Japanese   Presentation type:Symposium, workshop panel (nominated)  

    Venue:北海道大学  

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  • On rate selection of phage display antibody libraries: a rational strategy for isolating antibodies enabling rapid assay. International conference

    KATAKURA,Yoshio

    Phage display: The Chemical Set for Proteins.  2003 

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    Language:English   Presentation type:Poster presentation  

    Venue:Cambridge, Massachusetts, USA.  

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  • Design of affinity selections of ligands from phage display libraries based on kinetic studies. International conference

    KATAKURA,Yoshio

    The 6th world multiconference on systematics, cybernetics and informatics.  2002 

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    Language:English   Presentation type:Oral presentation (general)  

    Venue:Ohland, USA  

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  • Measurement of association rate constant of antibody-antigen interaction based on ELISA. Recombinant Antibody. International conference

    KATAKURA,Yoshio

    Recombinant Antibody  2002 

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    Language:English   Presentation type:Poster presentation  

    Venue:Cambridge, Massachusetts, USA.  

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  • A kinetic model for biopanning process considering antigen desorption and effective antigen concentration on solid phase. International conference

    KATAKURA,Yoshio

    Phage display technologies: Derect Protein Evolution  2001 

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    Language:English   Presentation type:Poster presentation  

    Venue:Cambridge, Massachusetts, USA.  

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  • Analysis and optimization of biopanning process of phage display libraries. International conference

    KATAKURA,Yoshio

    2000 International Chemical Congress of Pacific Basin Societies "Advance in Biochemical Production Technology"  2000 

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    Language:English   Presentation type:Poster presentation  

    Venue:Honolulu, Hawai, USA  

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  • Screening of pH-dependent antibodies from a phage display library by using affinity chromatography. International conference

    KATAKURA,Yoshio

    Recombinant Antibodies.  2000 

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    Language:English   Presentation type:Poster presentation  

    Venue:Baltimore, Martland, USA.  

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  • Fluorescence polarization study on a salt bridge between a single chain Fv and its antigen ribonuclease A. International conference

    KATAKURA,Yoshio

    Recombinant Antibodies.  2000 

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    Language:English   Presentation type:Poster presentation  

    Venue:Baltimore, Martland, USA  

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  • Energy metabolism and antibody production based on flux analysis in hybridoma. International conference

    KATAKURA,Yoshio

    Animal Cell Technology  1999 

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    Language:English  

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  • Control of an antibody-antigen interaction using an anion-induced conformational change in the antigen peptide. International conference

    KATAKURA,Yoshio

    Bioseparation Engineering: Recovery and recycle of resources to protect the global environment  1999 

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    Language:English   Presentation type:Poster presentation  

    Venue:Nikko, Tochigi  

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  • Energy metabolism and antibody production based on flux analysis in hybridoma cultivation. International conference

    KATAKURA,Yoshio

    Computer Application in Biotechnology  1998 

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    Language:English  

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  • Reduction of lake water eutrophication caused by nitrogen and phosphorous from paddy nearby field using a circular irrigation system. International conference

    KATAKURA,Yoshio

    Computer Application in Biotechnology  1998 

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    Language:English  

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Industrial property rights

  • 過冷却促進剤、過冷却促進剤の製造方法、抗凝固性組成物、及び、抗凝固性組成物の製造方法

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    Application no:2013-169606  Date applied:2013.8

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  • 界面活性剤及び界面活性剤の製造方法

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    Application no:2013-010967  Date applied:2013.1

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  • 同時糖化発酵方法

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    Application no:2012-064820  Date applied:2012.3

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  • エタノールの製造方法

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    Application no:2010-194832  Date applied:2010.8

    Announcement no:2012-50376  Date announced:2012.3

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  • 微生物複合体

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    Application no:2007-325246  Date applied:2007.12

    Announcement no:WO/2009/078438  Date announced:2009.6

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  • 蛋白質の消化物

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    Date applied:1993.6

    Announcement no:07-008179 

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  • CHO由来α1,6フコース転移酵素およびその遺伝子

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    Announcement no:2003-245079  Date announced:2003.9

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  • 糖蛋白質の生産方法

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    Announcement no:WO02/002793  Date announced:2003.8

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  • 高い会合速度定数を持つリガンドの選択法

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    Announcement no:2003-313197  Date announced:2003.1

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  • ポリマーの分子量変化の分析方法,およびその方法に用いる蛍光標識化合物

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    Announcement no:2003-247946  Date announced:2002.2

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  • 乳酸菌のスクリーニング方法

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    Application no:2016-162760 

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  • 乳酸菌の培養方法

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    Application no:2017-151959 

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  • 乳酸菌の培養方法

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    Application no:2017-151958 

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  • 乳酸菌の培養方法及び食品材料

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    Application no:2013-171447 

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  • 遺伝子増幅細胞の迅速選択法

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    Announcement no:2001-037478  Date announced:2001.3

    Patent/Registration no:4031154  Date issued:2007.12

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Works

  • 日本学術振興会 大学院生向け研究倫理eラーニングコース

    片倉啓雄, 中村征樹, 岡林浩嗣

    2019.7

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    Work type:Web Service  

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  • 大学院生向け研究倫理eラーニングコース

    片倉啓雄, 中村征樹, 岡林浩嗣

    2019

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  • 「大学生のための「安全・安心」の基礎講座」第7講「個人にできること(I)倫理・不正防止」日本国立大学協会編

    片倉啓雄

    2015

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    Work type:Web Service  

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  • Biotechnology Basic(CBT教材)

    片倉啓雄, 藤山和仁, 西川美香子, 福井希一

    2006

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    Work type:Educational material   Location:大阪大学  

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  • Biotechnology英会話(CBT教材)

    片倉啓雄, 藤山和人, 西川美香子, 福井希一

    2005

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    Work type:Educational material   Location:大阪大学  

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Awards

  • 第9回 JSEE AWARD

    2020.6   日本工学教育協会  

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    Country:Japan

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  • 第5回 日本e-Learning大賞 文部科学大臣賞

    2008.7   日本工業新聞社  

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    Country:Japan

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  • 日本生物工学会論文賞

    2002.10   日本生物工学会  

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    Country:Japan

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Research Projects

  • Control of quantity and quality of membrane vesicles produced by lactic acid bacteria

    Grant number:22K05396  2022.4 - 2025.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (C)

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    Grant amount:\4160000 ( Direct Cost: \3200000 、 Indirect Cost:\960000 )

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  • High-density cultivation method that does not allow lactic acid bacteria to produce lactic acid

    Grant number:21K05372  2021.4 - 2024.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (C)

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    Grant amount:\4160000 ( Direct Cost: \3200000 、 Indirect Cost:\960000 )

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  • The Construction of Ethics Education Program to Foster Engineers Who Aspire to Promote the Well-being of the Public

    Grant number:18H01067  2018.4 - 2021.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (B)

    Fudano Jun

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    Grant amount:\16770000 ( Direct Cost: \12900000 、 Indirect Cost:\3870000 )

    We proposed a new educational model named as "Positive Engineering Education" (hereafter PE2) which combines traditional academic and professional engineering education with "well-being" education based on the findings of well-being science. We also presented the components of the positive engineering education program, including specific learning and educational objectives and contents of foundation courses and the concept and implementation plan of "Well-being across the Curriculum."
    In addition, as educational materials to achieve the overall educational goal of PE2, we planned and produced video materials depicting a student's process of deepening his recognition of his own WB and how it relates to "good work" as an engineer.

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  • Regulation of lactic acid bacteria-derived membrane vesicle production with immunostimulatory activity and their functionality design

    Grant number:18K04857  2018.4 - 2021.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (C)

    YAMASAKI Shino

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    Grant amount:\4420000 ( Direct Cost: \3400000 、 Indirect Cost:\1020000 )

    Immunoglobulin A (IgA) plays an important role in defense mechanisms against pathogens on mucosal surfaces. Membrane vesicles (MVs) produced by a lactic acid bacterium, Latilactobacillus sakei enhanced IgA production in Peyer's patch cells isolated from the murine small intestine. To apply MVs as safe mucosal vaccine adjuvants, we analyzed the mechanisms of MV-mediated IgA production enhancement in Peyer's patch cells. It was excluded that MVs activated dendritic cells via Toll-like receptor 2 and induced the production of several factors involved in the class switch recombination of B cells and their differentiation into plasma cells. In addition, we found that culture factors such as culture period and temperature affected not only the amount of MVs produced by lactic acid bacteria but also the immunostimulatory effect, indicating the need to consider both the amount and the quality of MV.

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  • 免疫賦活作用をもたらす乳酸菌の表層に露出したリポテイコ酸部分構造の解析

    2017 - 2019

    日本学術振興会  科学研究費補助金,基盤研究C 

    片倉啓雄

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    Authorship:Principal investigator  Grant type:Competitive

    Direct Cost: \3700 )

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  • Engineering ethics education improvement by application of a standardized class questionnaire

    Grant number:26350200  2014.4 - 2017.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (C)

    Okita Yuji, MARUYAMA Takeo, FUDANO Jun, KATAKURA Yoshio, ITO Yuko, AOYAGI Manabu

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    Grant amount:\4680000 ( Direct Cost: \3600000 、 Indirect Cost:\1080000 )

    The most prominent outcome of this study is to enable to provide the result of the class questionnaire quantitative data set which could be used to improve the quality of the engineering ethics education.
    The teaching materials developed from the questionnaire, the common usage of teaching tips and materials among the concerned lectures, the analytical results of the better placement of engineering ethics subjects in the curriculum are also the outcomes of this study.

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  • 乳酸を生産させない乳酸菌の培養法

    2014 - 2015

    日本学術振興会  科学研究費補助金,挑戦的萌芽研究 

    片倉啓雄

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    Authorship:Principal investigator  Grant type:Competitive

    Direct Cost: \3900 )

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  • 地域資源の高度利用を図るバイオリファイナリーの基盤形成とその実用化

    2013 - 2017

    文部科学省  私立大学戦略的研究基盤形成支援事業 

    片倉啓雄

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    Authorship:Principal investigator  Grant type:Competitive

    Direct Cost: \172941 )

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  • 文部科学省私立大学戦略的研究基盤形成支援事業「地域資源の高度利用を図るバイオリファイナリーの基盤形成とその実用化」

    2013 - 2017

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    Authorship:Collaborating Investigator(s) (not designated on Grant-in-Aid) 

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  • Engineering ethics education improvement by application of a standardized class questionnaire

    Grant number:23501028  2011 - 2013

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (C)

    OKITA Yuji, MATSUKI Junya, AOYAGI Manabu, SHIMIZU Kazuo, OBA Kyoko, KATAKURA Yoshio, SHIMOMURA Naoyuki, MARUYAMA Takeo

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    Grant amount:\5070000 ( Direct Cost: \3900000 、 Indirect Cost:\1170000 )

    The goal of this research is to improve the teaching of engineering ethics in higher education by application of a standardized class questionnaire. The principal investigator developed a standardized questionnaire for an engineering ethics class by eliciting responses from a group of instructors of engineering ethics education.31 questions which were classified to five area were developed and applied to several engineering ethics classes of Japanese colleges and universities.The surveys were administered to several classes at the beginning and ending periods by a group of collaborative instructors so that they were able to assess changes of learners and thereby evaluate their educational quality. Changes and differences within and among classes were assessed. Many changes were found in attitudes, effort, and the level of understanding. By analyzing the results, the standardized class questionnaire has been shown to be useful for engineering ethics education improvement.

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  • Effects of intestinal bacterial adhesion to fibers on intestinal microflora

    Grant number:23656534  2011

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Grant-in-Aid for Challenging Exploratory Research

    KATAKURA Yoshio

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    Authorship:Principal investigator  Grant type:Competitive

    Direct Cost: \4160 )

    Surface proteins from Lactococcus lactis IL1403 cells purified by cellulose column were identified to be DnaK, GroEL, GAPDH and so on. The adsorption constants of the fluorescence labeled DnaK at pH 7.0 were estimated to be(2.7±0.9)×10^6、(2.5±0.5)×10^5、(3.7±2.2)×10^5、(8.7±3.2)×10^5 M^<-1> for cellulose, mucin, chitin and IL1403 cells, respectively. At pH 4.0, the adsorption constants for cellulose and mucin were estimated to be(5.7+-0.2) 10^6 and(4.4+-1.0) 10^6M^(-1), respectively. These results mean that lactic acid bacteria adhere to intestinal surface more tightly when they produce lactic acid.

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  • 地域分散型バイオエタノール生産のための省エネ低コスト固体連続並行複発酵に関する技術開発

    2010 - 2012

    環境省  地球温暖化対策技術開発事業 

    片倉啓雄

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    Authorship:Principal investigator  Grant type:Competitive

    Direct Cost: \20800 )

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  • Identifying Objectives, Teaching Methods, and Assessment Tools forEngineering Ethics Education: Toward the Development of a Model Syllabus

    Grant number:22500826  2010 - 2012

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (C)

    FUDANO Jun, ISHIHARA Koji, KATAKURA Yoshio, KIM Yonjyon, KOBAYASHI Yukito, TANAKA Hidekazu, TSUJII Hiroyuki, NATSUME Kenichi, MIKAMI Yoshiki, HOTTA Genji, SAEKI Noboru, YASUI Mitsukuni, FUJIKI Hiroyuki

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    Grant amount:\4810000 ( Direct Cost: \3700000 、 Indirect Cost:\1110000 )

    In 2010 and 2011 the syllabi of 358 engineering-ethics-related courses taught in educational institutions across the country were collected and analyzed. Based on the results of the above syllabus surveys, 42 candidates for learning and educational objectives were extracted and categorized in the five domains. In 2012 they were evaluated by expert panels in the two-round Delphi survey using the Internet, and 22 objectives were defined and categorized into four domains.

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  • Delignification of cellulosic biomass by a bacterium

    Grant number:21360403  2009 - 2011

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (B)

    KATAKURA Yoshio

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    Authorship:Principal investigator  Grant type:Competitive

    Direct Cost: \13500 )

    To establish biological delignification of biomass by Ureibacillus thermosphaericus, a rapid method evaluating the degree of deliginification using cellulose binding domain from Thermobifida fsuca Cel9B was developed. This bacterium was found to produce Mn-peroxidase and Cu-amine oxidase. It was possible to produce these enzymes by cultivating this bacterium in a synthetic medium containing seven amino acids and two vitamins.

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  • 乳酸菌が酵母を認識する機構の解明

    Grant number:21656217  2009 - 2010

    日本学術振興会  科学研究費補助金,挑戦的萌芽研究  挑戦的萌芽研究

    片倉啓雄

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    Authorship:Principal investigator  Grant type:Competitive

    Direct Cost: \3200 )

    乳酸菌が自らが生産する乳酸のストレスを感じると、それを緩和してくれる酵母に接着し、より有利な環境を作り出すため、自身と酵母を包み込む多糖を生産する、という作業仮説を検証した。
    Lactobacillus casei ATCC334株とSaccharomyces cerevisiae IFO0216株を,脱脂粉乳培地を用いて30℃で共培養し、酵母と接着した乳酸菌の遺伝子発現をDNAマイクロアレイを用いて解析したところ、機能未知の膜タンパク質が多数誘導されており、細胞外多糖の生合成に関与すると推定されるタンパク質の発現が高まっていた。また、共培養によってATCC334株の細胞外多糖生産も高まっていおり、仮説が裏づけられた。
    Lactococcus lactis IL1403株のDnaKにHis-tagを付与して大腸菌で発現させた。精製したDnaKは、マンナン、酵母、乳酸菌に対して親和性をもち、0.1mg/ml以上の濃度では乳酸菌と酵母を凝集させた。また、ムチン、セルロース、キチン、デンプンに対して、それぞれ、5.1(+/-)0.9、2.7(+/-)0.9、1.1(+/-)0.3、0.2(+/-)0.06 x 10E6 1/Mの吸着定数を有していた。乳酸菌はいわゆる善玉細菌であり、腸の蠕動運動に逆らって定着するには、腸壁に接着する必要があり、これにはDnaKなどの乳酸菌表層のタンパク質が接着タンパク質としての役割を担っていると考えられる。同時に、DnaKがセルロース、キチン、デンプンなど食物繊維に対しても親和性をもつことは、腸内細菌の定着を議論する際には、食物繊維との相互作用も考慮しなければならないことを示している。

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  • セルロースエタノール高効率製造のための環境調和型統合プロセス開発

    2008 - 2010

    新エネルギー・産業技術総合開発機構  新エネルギー技術研究開発 バイオマスエネルギー等高効率転換技術開発(先導技術開発) 

    片倉啓雄

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    Authorship:Principal investigator  Grant type:Competitive

    Direct Cost: \34500 )

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  • 新エネルギー・産業技術総合開発機構(NEDO),新エネルギー技術研究開発・バイオマスエネルギー等高効率転換技術開発,セルロースエタノール高効率製造のための環境調和型統合プロセス開発

    2008 - 2010

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  • Development of a tracking method for minor group in microbial community and its industrial application

    Grant number:19360374  2007 - 2008

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (B)

    SHIOYA Suteaki, KATAKURA Yoshio, NINOMIYA Kazuaki, YAMAMOTO Shinjiro, HAYASHI Shuhei, FUJII Takao, NINOMIYA Kazuaki

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    Grant type:Competitive

    Direct Cost: \16140 )

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  • 生物的無毒化処理によるセルロース系バイオマスの効率的利用

    2007

    科学技術振興機構  地域イノベーション創出総合支援事業「シーズ発掘試験」 

    片倉啓雄

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    Authorship:Principal investigator  Grant type:Competitive

    Direct Cost: \2000 )

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  • 微生物固体発酵による高効率なリグノセルロース完全利用システムの開発

    2007

    新エネルギー・産業技術総合開発機構  新エネルギー技術研究開発 バイオマスエネルギー等高効率転換技術開発(先導技術開発) 

    片倉啓雄

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    Authorship:Principal investigator  Grant type:Competitive

    Direct Cost: \6000 )

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  • 医薬品等の有効性・安全性を保証するための分析・解析技術の評価と標準化に関する研究

    2005 - 2006

    厚生労働省  厚生労働科学研究費補助金 創薬等ヒューマンサイエンス総合研究事業 

    林譲

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    Grant type:Competitive

    Direct Cost: \16100 )

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  • 微生物固体発酵による高効率なリグノセルロース完全利用システムの開発

    2005 - 2006

    新エネルギー・産業技術総合開発機構  バイオマスエネルギー高効率転換技術開発 

    片倉啓雄

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    Authorship:Principal investigator  Grant type:Competitive

    Direct Cost: \11000 )

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  • 東南アジアにおける乳酸菌資源の学術調査及びデータベースの構築

    2004 - 2005

    日本学術振興会  科学研究費補助金基盤研究B海外学術調査 

    塩谷捨明

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    Grant type:Competitive

    Direct Cost: \11400 )

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  • 非分解性と信じられているプラスチックの分解酵素遺伝子のクローニング

    2004 - 2005

    日本学術振興会  科学研究費補助金萌芽研究 

    片倉啓雄

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    Authorship:Principal investigator  Grant type:Competitive

    Direct Cost: \3500 )

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  • 微生物共生システムを利用した発酵生産法の開発

    2003 - 2004

    日本学術振興会  科学研究費補助金基盤研究B 

    塩谷捨明

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    Grant type:Competitive

    Direct Cost: \13300 )

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  • Methodological Research of the Fuzzy Control in Insulin Production

    Grant number:12650752  2000 - 2002

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (C)

    KISHIMOTO Michimasa, OMASA Takeshi, KATAKURA Yoshio

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    Grant amount:\3100000 ( Direct Cost: \3100000 )

    The objective of the research is the development of Fuzzy control system, which include the know-how of the superior fermentation technique, and is suitable for the production of Insulin by Saccharomyces cerevisiae. Insulin is important pharmaceuticals for diabetes, and produced mainly abroad, for example, Novo. Co. Ltd in Denmark has been producing Insulin using yeast However, we can easily imagine the severe technical problems in the production, because yeast produce alcohol, which seriously effect on the cell growth and the production. There fore, we need to perform many culture experiment in order to develop the fuzzy control algorithm and the on-line control system.
    In order to make sure the validity of the fuzzy control system, we tried to use the control system in the alcohol production by Saccharomyces cerevisiae. We succeeded to control the glucose feeding and to increase the growth rate and shorten culture time for the alcohol production. Our fuzzy control has a simple structure of fuzzy rules and membership functions compared with the normal fuzzy control, which has been developed in Japanese sake brewery company. Our approach applied to the immobilized cell system for alcohol production, and we can keep the glucose concentration at suitable level for the ethanol production successfully. In the fuzzy control, we have a severe problem which is the manual tuning of membership functions and manual adjustment of production rules, because we spend a lot of trouble for the procedures and they influence the efficiency of the fuzzy control serious ly. Then we tried to make the display system which shows the membership functions causing the fuzzy reasoning error. Taking into consideration of the suggestion from the display system, we modified the membership function. If the modification is small, the fuzzy control usually improved a little bit. But, if modified largely, the fuzzy control is damaged, because the many rule, which is not considered into the modification effect was effected by the modification. We also investigate the use of the proteome analysis technique for the fuzzy control development. Now, 2-D electrophoresis gel image is not stable but we succeed it to distinguish the culture state with the aid on ANN. Therefore we will be able to use the information from proteome analysis for the development of fuzzy control system.

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  • Analysis and Selection for gene-amplified cell based on FISH

    Grant number:11650817  1999 - 2001

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (C)

    OMASA Takeshi, KATAKURA Yoshio, KISHIMOTO Michimasa

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    Grant amount:\3400000 ( Direct Cost: \3400000 )

    In order to establish an easy and quick construction method for obtaining a stable and highly productive gene-amplified recombinant Chinese Hamster Ovary (CHO) cell line, various kinds of stepwise methotrexate (MTX) selection were carried out. The specific growth and production rates of the cell were compared with each other, and the distribution of the amplified gene location was determined using fluorescence in situ hybridization (FISH). The specific growth and production rates of the cell pool reached the highest levels under the selection condition in which the stepwise increase in the MTX concentration was most gradual; about 82 % of amplified genes were observed near the telomeric region. To clarify the behavior of gene-amplified cell pools during a stepwise increase of MTX concentration, we investigated isolated gene-amplified clones derived from gene amplified cell pools. As a result, telomere-type clones, in which the amplified gene was located near the telomeric region, were found to be more stable and productive the other types of clones. Telomere-type clones had over 100 copies of amplified genes in the chromosomal DNA In contrast a large number of other types of clones had less than 10 copies of amplified genes. During long-term cultivation in the absence of MTX, in other types of clones, amplified genes rapidly decreased in the chromosomal DNA.
    Using a fluorescein isothiocyanatelabeled methotrexate (F-MTX) reagent with flow cytomery, we were easily able to distinguish between highly productive cells and the other types of cells. The level of fluorescence differed according to the difference in resistance to MTX. Based on this new finding, highly productive gene-amplified cells could be isolated from heterogeneous gene amplified cell pools more easily than by the method of limiting dilution assay. The limiting-dilution method requires several months to obtain highly productive gene amplified cells, while our flowcytometry-based method of selection requires only a few weeks.

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  • キャプチャリングカセット法によるファージディスプレイライブラリーの速度論的選抜

    1998 - 1999

    日本学術振興会  科学研究費補助金基盤研究B 

    福崎栄一郎

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    Grant type:Competitive

    Direct Cost: \13500 )

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  • 塩橋の成立条件のファージディスプレイを利用した統計的解析

    1997

    日本学術振興会  科学研究費補助金重点領域研究(2) 

    片倉啓雄

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    Authorship:Principal investigator  Grant type:Competitive

    Direct Cost: \1900 )

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  • Construction of hybrid liver support system using gene amplified recombinant mammalian cells

    Grant number:07558125  1995 - 1997

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research  Grant-in-Aid for Scientific Research (A)

    SUGA Ken-ichi, OMASA Takeshi, KATAKURA Yoshio, KISHIMOTO Michimasa

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    Grant amount:\12600000 ( Direct Cost: \12600000 )

    In order to establish the cell line which was suitable for hybrid artificial liver support system, an ammonia metabolizing activity was given to Chinese Hamster Ovary (CHO) and HepG2 cell line using genetic engineering techniques. CHO-K1 and HepG2 cells were transformed with pSV2-GS vector which contains glutamine synthetase gene connected with SV40 or CMV promoter. The recombinant cell line was selected under the various concentrations of glutamine synthetase inhibitor, methionine sulfoximine (MSX). The obtained MSX tolerable cell line had the high glutamine synthetase activity and could remove the ammonium from medium. The kinetic parameters of this cell line were determined under 0,1, or 2mM ammonia concentration. The specific ammonium consumption rates of established CHO and HepG2 cell line during growth phase were about one fourth and one seventh of that of primary hepatocyte respectively.

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  • オリゴペプチドリガンドを用いたアフィニティ分離システム

    Grant number:07855092  1995

    日本学術振興会  科学研究費助成事業  奨励研究(A)

    片倉 啓雄

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    Grant amount:\900000 ( Direct Cost: \900000 )

    【方法】ファージベクターfUSE5を用いて、コート蛋白質g3のN末端に、2つのシステイン残基に挟まれた6残基のランダムペプチドが発現するようにランダムペプチドライブラリーを構築した。モデル蛋白質として牛膵臓リボヌクレアーゼ(RNaseA)を用いてこれに対して親和性を持つペプチドを提示するファージクローンを、ライブラリーから固層に固定したRNaseAによって選択した。この際、得られるペプチドとRNaseAとの間の静電的な結合が強調されるように、RNaseAの等電点(9.6)から離れたpH6.0で、かつイオン強度の低い10mMリン酸緩衝液を用いてアフィニティ選択を行った。
    【結果】RNaseAに対して親和性を持つペプチドを提示したファージクローンが得られ、これらのファージのRNaseAに対する親和性はイオン強度を上昇させると顕著に低下した。現在塩基配列からこのクローンの提示するペプチドの配列を解析しているが、これまでに得られた結果から、(1)目的蛋白質に対する親和性を有するオリゴペプチドリガンドが取得でき、(2)得られたリガンドの結合はイオン強度依存性が顕著であることが明らかとなった。
    【結論】以上のことから、本研究に用いた手法によって、NaClの添加などによる温和な条件で目的蛋白質を溶出回収することができる理想的なペプチドリガンドが得られると考えられる。

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Teaching Experience

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Social Activities

  • 安全・技術者倫理関係の講演(トライボロジー学会大会(2015年)、日本乳酸菌学会泊り込み研究会(2015年)、日本電気学会全国大会シンポジウム(2014年)、電気学会教育フロンティア研究会(2014)、日本工学教育協会(2010, 2009, 2008年)、有明工業高等専門学校(2010年)、電気学会教育フロンティア研究会(2009年)、宮崎大学工学部(2009年)、日本鉄鋼協会大会(2009年)、工業教育研究講演会(2008年)、青山学院大学理工学部(2007年)、日本機械学会大会(2007年)、私立大学環境保全協議会第22回夏期研修研究会(2007年)、東京大学工学研究科(2007年)、愛媛大学農学部(2007年)、室蘭工業大学(2006年))

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Devising educational methods

  • ・微生物学2の授業では、以下の施行を行った。 (1) 15回の授業それぞれの内容を問う記述式の問題を3つ程度、初回の授業で配布した。 (2) 学生にはそれぞれの問題について予習をさせ、授業後にミニッツペーパーで解答を提出させた。 (3) 添削して翌週の授業の最初に返却して講評を行った。 その結果、期末試験では平均点が前年に比べて3.5点向上した。
    ・フレッシュマンゼミナールでは、要点を聞き取りメモを取る方法を教授し、ミニッツペーパーに書かせた授業の要点をその場で添削指導している。また、覚えることと理解することの違いを説明した上、学ぶ目的を各自に設定させている。
    ・学部4年生の安全教育において、研究室間の相互巡視を行わせ、良い点を翌週の授業で報告させる。さらに、それを踏まえて自研究室の問題点を改善させ、報告させる。 ・大学院生に自身の研究テーマの意義、課題、解決のための戦略をまとめたプレゼンをさせ、研究をデザインする力を養う。

Teaching materials

  • 1. 片倉啓雄 他3名「Biotechnology Basic」、大阪大学(2006) 工学系の学部学生の専門英語力向上のため、再生医療などの最新のトピックスを基本学術用語とともに解説したnative speakerの音声と教材の画像が利用できるCBT(computer based training)教材。
    2. 片倉啓雄 他4名「Biotechnology 英会話」、大阪大学(2006) 工学系の学部学生の専門英語力向上のため、専門的な内容の会話、プレゼンテーションのための基本構文などをまとめたnative speakerの音声と教材の画像が利用できるCBT(computer based training)教材。
    3. 片倉啓雄・堀田源治「安全倫理」、培風館(2008). 社会の安全・安心を実現するための現実的な考え方と具体的なテクニック、日頃からそれを実践するためのポイントを、ケーススタディーをまじえて平易に解説した。
    4. 片倉啓雄・山本仁「バイオ系実験安全オリエンテーションDVD付き」、東京化学同人(2009) 生化学系実験の安全のため、基本操作と事故の再現シーンのDVDを作成し、解説と演習問題をまとめた。
    5. 片倉啓雄「遺伝子工学」(基礎生物学テキストシリーズ)近藤昭彦、芝崎誠司編、化学同人、第5章「遺伝子クローニング」pp68-82 (2012)
    6. 片倉啓雄,大政健史,長沼孝文,小野比佐好 編著「有用微生物培養のイロハ」pp. 1-5, 18-81, 93-98, 129-137, 153-185, 195-249, 280-288, 323-324(337頁中183頁執筆), エヌ・ティ・エス (2014)
    7. 片倉啓雄「実践・化学英語リスニング生化学編」 Part 2, Chapter 4~6,福井希一・福住俊一・上田サーソン編,化学同人 (2014).
    8. 片倉啓雄,「大学生のための「安全・安心」の基礎講座」第7講「個人にできること(Ⅰ)倫理・不正防止」日本国立大学協会編 (2015). 9. 片倉啓雄,大政健史,長沼孝文,小野比佐好 編著「有用微生物培養のイロハ」改訂第二版, pp. 1-5, 18-87, 90, 101-106, 131, 139-167, 183-216, 222, 225-256, 265-280, 310-318, 353-354(367頁中205頁執筆, 初版に33頁加筆), エヌ・ティ・エス (2018)
    9. 片倉啓雄,「バイオ実験を安全に行うために」第3章, pp45-77(単著), 第4章, pp79-107(共著), 化学同人 (2018)

Teaching method presentations

  • 1. 「「世界に通用するProfessional Engineerを育てるための安全教育」報告書」,三恵社(2006)
    2. 「学生自身に考えさせるボトムアップ的な安全・倫理教育を目指して」、第1回安心と安全のための教育シンポジウム「教え子の安全・安心・健康への感性を高めるには」要旨集p15-20、2006年1月31日、大阪大学
    3. 「研究室での安全への取り組み-大阪大学での好事例を中心に-」、第2回安心と安全のための教育シンポジウム「安全・安心な教育研究環境を実現するには」要旨集p2-7、2007年1月30日、大阪大学
    4. 「安全にはトップダウンとボトムアップの双方が必要-学生に能動的に安全活動に参加させるには-」私立大学環境保全協議会第22回夏期研修研究会、2007年8月7日、同志社大学
    5. 「工学倫理教育とバイオテクノロジー」、平成20年度日本機械学会大会、2007年9月9-12日、関西大学
    6. 「安全を保証される立場から保証する立場へ」、日本工学教育協会 第8回ワークショップ「技術者倫理」、2008年2月2日、日本大学理工学部
    7. 「技術者倫理教育と安全教育との融合-技術者が知るべき実践的安全倫理-」平成20年度工学・工業教育研究講演会講演論文集、p290-291、2008年8月1-3日、神戸大学
    8. 「安全倫理-気づかせ、考えさせ、実践させる-」日本工学教育協会 第9回ワークショップ「技術者倫理」、2009年2月21日、日本大学理工学部
    9. 「安全倫理-社会の安全・安心のための基本をどのように教えるか-」日本鉄鋼協会 社会鉄鋼工学部会安全・快適なシステム構築研究フォーラム 第13回公開セミナー、2008年11月20日、日本鉄鋼協会
    10. 「大学での安全教育-学生自身に気づかせ、考えさせ、実践させる-」日本鉄鋼協会第157回春季講演大会、2009年3月30日、東京工業大学
    11. 「安全を保証される立場から保証する立場へ-安全教育と技術者倫理教育の融合-」第3回専門職・技術者倫理ワークショップ、2009年11月25日、宮崎大学
    12. 「技術者倫理教育の目的は何か-社会の安全・安心との関連を中心に考える-」電気学会教育フロンティア研究会、2009年12月11,12日、福井大学
    13. 「倫理的問題が生じる背景と今時の学生の気質」日本工学教育協会 第10回ワークショップ「技術者倫理」、2010年2月26-27日、金沢大学東京虎ノ門キャンパス
    14. 「社会の安全・安心と技術者倫理教育」日本工学教育協会 第11回ワークショップ技術者倫理、2011年2月26日、金沢大学東京虎ノ門キャンパス
    15. 「実験系学部の安全教育 …無知の罪を知り、既知の危険を学び、未知の危険に対処する人材を育てるために」日本鉄鋼協会第163回春季講演大会, 新時代の安全マネジメントフォーラム(招待),2012年,3/30,横浜国立大学
    16. 「キャリアデザインと技術者倫理」電気学会教育フロンティア研究会, 研究会資料 FIE 2013(25-38), 7-9, 2013年, 12/6, 関西大学
    17. 「いかにして技術者の責務とやりがいに気付かせるか」日本電気学会全国大会シンポジウム, 1-1H-2, 2014年3月19日, 愛媛大学
    18. 「技術者倫理教育の目的は何か」日本トライボロジー学会2015年会, 2015年5月27日, 姫路商工会議所
    19. 片倉啓雄“技術者・研究者にとってののwell-beingとは”日本乳酸菌学会泊り込み研究会(招待), 2015年5月15日, サンライズ淡路
    20. 片倉啓雄“技術者倫理への動機づけを高める指導法” 日本工学教育協会 第16回ワークショップ「技術者倫理」(招待),2015年12月11-12日,東京工業大学大岡山キャンパス.
    21. 片倉啓雄“研究倫理をどのように教えるか-技術者倫理教育の視点から-”AMED RIOネットワーク意見聴取会(招待), 2016年12月9日, 新大阪・CICI研修センター.
    22. 片倉啓雄“研究倫理をどのように教えるか-技術者倫理教育の視点から-”AMED RIOネットワーク意見聴取会(招待), 2017年1月20日, 東京・大手町.
    23. 片倉啓雄“受講者の価値観に刺激を与える授業方法”日本工学教育協会 第15回ワークショップ「技術者倫理」(招待),2017年2月3-4日, 東京工業大学.
    24. 片倉啓雄“技術者・研究者が知るべき倫理-あなたのWell-beingのために-”信州大学研究者倫理特別講義, 2017年6月20日, 信州大学
    25. 片倉啓雄“技術者・研究者が知るべき倫理-あなたのWell-beingのために-”有明工業高等専門学校, 2017年10月18日, 有明高等専門学校
    26. 片倉啓雄“科学に携わる者の倫理―技術者倫理の視点から―”第31回日本耳鼻咽喉科学会専門医講習会(招待), 2017年11月11日, 12日, 神戸ポートピアホテル
    27. 片倉啓雄“科学に携わる者の倫理―技術者倫理の視点から―”日本医療研究開発機構, 研究公正シンポジウム「考え、気づかせる」研究倫理教育(招待), 2017年11月29日, 東京・北とぴあ
    28. 片倉啓雄“志向倫理教育の実践例”第3回ワークショップ「研究倫理」(招待), 2018年2月17日, 金沢大学東京虎ノ門キャンパス.
    29. 片倉啓雄“科学に携わる者のための倫理”千葉市医師会医療安全講習会(招待), 2018年6月8日, 千葉市総合保健医療センター
    30. 片倉啓雄“科学に携わる者のための倫理”川崎医療福祉大学 平成30年度コンプライアンス研修(招待), 2018年5月15日
    31. 片倉啓雄“科学に携わる者のための倫理 ~技術者倫理教育の視点から~ ”京都府立医科大学倫理研修会(招待), 2018年7月18日
    32. 片倉啓雄“志向倫理教育の実践例―ルールを提案できる人材の育成―”平成30年度工学教育研究講演会講演論文集,p,2018年8月29-31日,名古屋工業大学.
    33. 片倉啓雄“科学に携わる者のための倫理 ~技術者倫理教育の視点から~ ”横浜市立大学コンプライアンスセミナー(招待), 2018年9月27日

Special notes on other educational activities

  • 2009年~ 技術者倫理教育に関するワークシップ(日本工学教育協会)オーガナイザー
    2008年7月第5回 日本e-Learning大賞 文部科学大臣賞(大阪大学現代GP事務局・専門英語e-Learningプログラム開発グループとして)
    2006年、2007年に「安心と安全のための教育シンポジウム」を主催。